WormBase Tree Display for Gene: WBGene00060179

WBGene00060179 SMap: S_parent: Sequence: Crem_Contig24
  Identity: Version: 3
    Name: CGC_name: Cre-lim-6 From_analysis: Inferred_from_orthology
      Sequence_name: CRE17200
      Molecular_name: CRE17200
        CRE17200.1
        RP44580
      Other_name: cr01.sctg17.wum.66
      Public_name: Cre-lim-6
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:48 WBPerson2970 Name_change: CGC_name: Cre-lim-6
        3 03 Jul 2008 11:45:31 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE17200
                Other_name: cr01.sctg17.wum.66
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lim
    RNASeq_FPKM: WBls:0000004 0.168531 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0.287415 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.406299 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 1.48847 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        1.91918 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        2.17852 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        2.86858 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        3.31967 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        2.10142 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        2.82287 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        3.48139 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 0.362171 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        0.563354 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        1.12202 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        1.27475 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        1.2791 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        1.28346 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        1.29857 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        1.94981 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
      WBls:0000063 0.184421 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        0.423811 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        0.6632 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        1.00712 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        1.01784 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        1.95369 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        2.87369 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
        3.4963 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
      WBls:0000101 0.83516 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        1.21024 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00155651
    Ortholog (27)
    Paralog (13)
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Is an ortholog of C. elegans lim-6. In C. elegans, lim-6 is involved in several processes, including regulation of gene expression; system process; and uterus morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE17200
    Corresponding_transcript: CRE17200.1
    Other_sequence: ES570229.1
      Acan_isotig17193
      SS02867
      TSC06900_1
      SSC02344_1
      Dviv_isotig26261
      JI212657.1
  Experimental_info: Expr_pattern: Expr1113092
    Microarray_results: GPL14146_CRE17200_448-507_0.916_12_C
      GPL14146_CRE17200_531-590_0.938_6_B
      GPL14146_CRE17200_665-724_0.896_21_A
  Method: Gene