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WormBase Tree Display for Gene: WBGene00058617

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Name Class

WBGene00058617SMapS_parentSequenceCrem_Contig27
IdentityVersion3
NameCGC_nameCre-phat-6From_analysisInferred_from_orthology
Sequence_nameCRE15434
Molecular_nameCRE15434
CRE15434.1
RP24904
Other_namecr01.sctg12.wum.122
Public_nameCre-phat-6
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:49WBPerson2970Name_changeCGC_nameCre-phat-6
303 Jul 2008 11:45:19WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE15434
Other_namecr01.sctg12.wum.122
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classphat
RNASeq_FPKMWBls:00000040.156059From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.312118From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002740.3116From_analysisRNASeq.remanei.WBls:0000027.control_mean
42.9259From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
48.8559From_analysisRNASeq.remanei.WBls:0000027.control_median
54.7859From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
5.53371From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
58.0009From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:000003810.1242From_analysisRNASeq.remanei.WBls:0000038.control_mean
1.12066From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
11.7982From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
17.4536From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004112.0363From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
12.1959From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
13.9829From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
5.8641From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
6.57154From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
7.9621From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
9.76881From_analysisRNASeq.remanei.WBls:0000041.control_mean
9.9992From_analysisRNASeq.remanei.WBls:0000041.control_median
WBls:0000063 (12)
WBls:000010110.8963From_analysisRNASeq.remanei.total_over_all_stages.control_median
13.3714From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (20)
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans phat-6. In C. elegans, phat-6 is involved in pharyngeal gland morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE15434
Corresponding_transcriptCRE15434.1
Other_sequenceOden_isotig03417
Oden_isotig03420
Oden_isotig03421
Experimental_infoExpr_patternExpr1094889
Microarray_resultsGPL14146_CRE15434_421-480_0.916_4_A
MethodGene