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WormBase Tree Display for Gene: WBGene00057242

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Name Class

WBGene00057242SMapS_parentSequenceCrem_Contig16
IdentityVersion3
NameCGC_nameCre-nhr-62From_analysisInferred_from_orthology
Sequence_nameCRE08264
Molecular_nameCRE08264
CRE08264.1
RP33514
Other_namecr01.sctg8.wum.182
Public_nameCre-nhr-62
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:43WBPerson2970Name_changeCGC_nameCre-nhr-62
303 Jul 2008 11:45:10WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE08264
Other_namecr01.sctg8.wum.182
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000044.37631From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
4.82851From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
5.2807From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:000002710.1216From_analysisRNASeq.remanei.WBls:0000027.control_median
13.0306From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
16.4475From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
1.98505From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
7.21256From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
9.66893From_analysisRNASeq.remanei.WBls:0000027.control_mean
WBls:000003812.0808From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
1.67502From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
7.82466From_analysisRNASeq.remanei.WBls:0000038.control_mean
9.71817From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
WBls:00000410.97603From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
0.993159From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
1.51229From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
2.40141From_analysisRNASeq.remanei.WBls:0000041.control_median
2.46242From_analysisRNASeq.remanei.WBls:0000041.control_mean
3.29053From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
3.59653From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
4.40601From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063 (12)
WBls:00001013.38527From_analysisRNASeq.remanei.total_over_all_stages.control_median
4.42532From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00152702
00152703
00152704
00152705
Ortholog (31)
Paralog (273)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-62.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE08264
Corresponding_transcriptCRE08264.1
Other_sequence (21)
Experimental_infoExpr_patternExpr1099377
Microarray_resultsGPL14146_CRE08264_1064-1123_0.922_12_B
GPL14146_CRE08264_1327-1386_0.943_1_A
GPL14146_CRE08264_874-933_0.822_115_C
MethodGene