WormBase Tree Display for Gene: WBGene00056343

WBGene00056343 SMap: S_parent: Sequence: Crem_Contig4
  Identity: Version: 3
    Name: CGC_name: Cre-pud-4 From_analysis: Inferred_from_orthology
      Sequence_name: CRE28105
      Molecular_name: CRE28105
        CRE28105.1
        RP32077
      Other_name: cr01.sctg6.wum.416
      Public_name: Cre-pud-4
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:03 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE28105
                Other_name: cr01.sctg6.wum.416
        3 20 Dec 2012 16:05:08 WBPerson2970 Name_change: CGC_name: Cre-pud-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pud
    RNASeq_FPKM: WBls:0000004 0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
            RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
            RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
      WBls:0000024 (43)
      WBls:0000027 0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
            RNASeq.remanei.WBls:0000027.control_mean
            RNASeq.remanei.WBls:0000027.control_median
      WBls:0000038 5.89716 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        6.14798 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        6.56041 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        7.6361 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 101.445 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        111.275 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        124.119 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        49.6392 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        59.2062 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        70.1842 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        85.8146 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        85.9781 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
      WBls:0000063 (12)
      WBls:0000101 49.063 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        78.5819 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (16)
    Paralog: WBGene00056345 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00056344 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00073926 Caenorhabditis remanei From_analysis: TreeFam
            GeneACeDB-Compara
      WBGene00078826 Caenorhabditis remanei From_analysis: TreeFam
            GeneACeDB-Compara
      WBGene00068632 Caenorhabditis remanei From_analysis: TreeFam
            GeneACeDB-Compara
      WBGene00073927 Caenorhabditis remanei From_analysis: TreeFam
            GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Up-Regulated in long-lived daf-2 and Up-regulated in Daf-2. Is an ortholog of C. elegans pud-4. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE28105
    Corresponding_transcript: CRE28105.1
    Other_sequence: JI469490.1
  Experimental_info: Expr_pattern: Expr1113735
    Microarray_results: GPL14146_CRE28105_362-421_0.938_1_A
  Method: Gene