WormBase Tree Display for Gene: WBGene00055320

WBGene00055320 SMap: S_parent: Sequence: Crem_Contig10
  Identity: Version: 3
    Name: CGC_name: Cre-cdh-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE03080
      Molecular_name: CRE03080
        CRE03080.1
        RP32147
      Other_name: cr01.sctg5.wum.44
      Public_name: Cre-cdh-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:45 WBPerson2970 Name_change: CGC_name: Cre-cdh-1
        3 03 Jul 2008 11:44:56 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE03080
                Other_name: cr01.sctg5.wum.44
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cdh
    RNASeq_FPKM: WBls:0000004 1.56873 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        1.9633 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        2.35787 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 1.06555 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        10.7168 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        6.39226 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        6.67648 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        7.46179 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        8.53132 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
      WBls:0000038 1.07895 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        2.13593 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        2.63548 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        2.69335 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 0.388966 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.439522 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        0.487867 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.551239 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        0.552786 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        0.614612 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        0.653118 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        0.732633 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 0.277683 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        0.278803 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        0.316593 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        0.369631 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        0.460459 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        0.464766 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        0.481713 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        0.589867 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        0.612641 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
      WBls:0000101 0.601254 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        1.67396 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00150711
      00150712
      00150713
    Ortholog (31)
    Paralog (14)
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity. Predicted to be involved in homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in membrane. Is an ortholog of C. elegans cdh-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE03080
    Corresponding_transcript: CRE03080.1
    Other_sequence: CRC01112_1
      Tcir_isotig12335
      CR07801
  Experimental_info: Expr_pattern: Expr1110377
    Microarray_results: GPL14146_CRE03080_4109-4168_0.800_64_A
      GPL14146_CRE03080_5530-5589_0.847_17_B
      GPL14146_CRE03080_6731-6790_0.890_5_C
  Method: Gene