Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00055149

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00055149SMapS_parentSequenceCrem_Contig7
IdentityVersion3
NameCGC_nameCre-cls-3From_analysisInferred_from_orthology
Sequence_nameCRE25337
Molecular_nameCRE25337
CRE25337.1
RP41347
Other_namecr01.sctg4.wum.496
Public_nameCre-cls-3
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:44:55WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE25337
Other_namecr01.sctg4.wum.496
321 Jun 2010 10:27:21WBPerson2970Name_changeCGC_nameCre-cls-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcls
RNASeq_FPKMWBls:000000414.9611From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
16.6146From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
18.2681From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:00000270.754044From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
4.71996From_analysisRNASeq.remanei.WBls:0000027.control_mean
5.27336From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
5.44633From_analysisRNASeq.remanei.WBls:0000027.control_median
5.61931From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
7.23312From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:00000380.98168From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
2.9639From_analysisRNASeq.remanei.WBls:0000038.control_mean
3.60915From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
4.30087From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000411.59959From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
1.77602From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
1.91323From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
1.98417From_analysisRNASeq.remanei.WBls:0000041.control_median
2.05511From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
2.16236From_analysisRNASeq.remanei.WBls:0000041.control_mean
2.76178From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
2.86846From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:00001011.94725From_analysisRNASeq.remanei.total_over_all_stages.control_median
3.4469From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (32)
ParalogWBGene00054943Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00077359Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00059124Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00075621Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: CLASP N-terminal domain; TOG domain; Armadillo-type fold; CLASP N terminal; and Armadillo-like helical. Is an ortholog of C. elegans cls-3. In C. elegans, cls-3 is involved in astral microtubule organization and establishment of mitotic spindle localization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE25337
Corresponding_transcriptCRE25337.1
Other_sequenceCBC17725_1
Experimental_infoExpr_patternExpr1106534
Microarray_resultsGPL14146_CRE25337_2717-2776_0.943_1_B
GPL14146_CRE25337_2884-2943_0.934_2_A
GPL14146_CRE25337_694-753_0.778_170_C
MethodGene