WormBase Tree Display for Gene: WBGene00054479

WBGene00054479 SMap: S_parent: Sequence: Crem_Contig6
  Identity: Version: 5
    Name: CGC_name: Cre-trip-4 Person_evidence: WBPerson555
          From_analysis: Inferred_from_orthology
      Sequence_name: CRE26332
      Molecular_name: CRE26332
        CRE26332.1
        RP21243
      Other_name: cr01.sctg3.wum.478
        Cre-asc-1 Person_evidence: WBPerson555
      Public_name: Cre-trip-4
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:44 WBPerson2970 Name_change: CGC_name: Cre-asc-1
        3 03 Jul 2008 11:44:50 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE26332
                Other_name: cr01.sctg3.wum.478
        4 13 Nov 2017 15:54:28 WBPerson1983 Name_change: CGC_name: Cre-trip-4
                Other_name: Cre-asc-1
        5 22 Dec 2017 13:03:49 WBPerson1983 Name_change: CGC_name: Cre-trip-4
                Other_name: Cre-trip-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: trip
    RNASeq_FPKM: WBls:0000004 12.8146 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        12.8501 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        12.8856 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 0.657252 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        10.0051 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        10.8643 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        11.0781 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        11.292 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        17.207 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 11.8931 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        3.19449 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        8.31462 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        9.85626 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
      WBls:0000041 17.4758 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        18.7349 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        20.4368 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        28.784 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        28.9393 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        37.1313 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        38.8357 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        41.0213 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
      WBls:0000063 (12)
      WBls:0000101 10.3603 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        12.6358 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00149813
      00149814
      00149815
      00149816
    Ortholog (28)
    Structured_description: Automated_description: Predicted to enable zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is an ortholog of C. elegans trip-4. In C. elegans, trip-4 is involved in dauer larval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE26332
    Corresponding_transcript: CRE26332.1
    Other_sequence (28)
  Experimental_info: Expr_pattern: Expr1116836
    Microarray_results: GPL14146_CRE26332_1110-1169_0.945_2_A
      GPL14146_CRE26332_1228-1287_0.967_1_B
      GPL14146_CRE26332_675-734_0.927_10_C
  Method: Gene