WormBase Tree Display for Gene: WBGene00054410

WBGene00054410 SMap: S_parent: Sequence: Crem_Contig6
  Identity: Version: 3
    Name: CGC_name: Cre-lir-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE26375
      Molecular_name: CRE26375
        CRE26375.1
        RP32788
      Other_name: cr01.sctg3.wum.410
      Public_name: Cre-lir-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:44:49 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE26375
                Other_name: cr01.sctg3.wum.410
        3 04 Jul 2008 11:06:35 WBPerson4055 Name_change: CGC_name: Cre-lir-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lir
    RNASeq_FPKM: WBls:0000004 55.8876 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        59.1507 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        62.4137 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 35.052 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        37.9805 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        44.3246 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        53.5972 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        56.5917 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        6.68118 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 28.6745 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        36.2749 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        43.42 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        6.32876 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 10.5542 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        11.7587 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        13.3776 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        37.3591 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        40.0821 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        61.3406 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        70.8995 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        72.5622 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
      WBls:0000063 (12)
      WBls:0000101 14.3737 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        28.229 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (26)
    Paralog: WBGene00051086 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00053521 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00053680 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00054409 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00054411 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00055191 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00058209 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00059722 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00069605 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is an ortholog of C. elegans lir-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE26375
    Corresponding_transcript: CRE26375.1
    Other_sequence: CJC03295_1
  Experimental_info: Expr_pattern: Expr1100515
    Microarray_results: GPL14146_CRE26375_397-456_0.910_24_C
      GPL14146_CRE26375_596-655_0.950_2_A
      GPL14146_CRE26375_769-828_0.866_68_B
  Method: Gene