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WormBase Tree Display for Gene: WBGene00053553

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Name Class

WBGene00053553SMapS_parentSequenceCrem_Contig1
IdentityVersion3
NameCGC_nameCre-pigm-1From_analysisInferred_from_orthology
Sequence_nameCRE02146
Molecular_nameCRE02146
CRE02146.1
RP35858
Other_namecr01.sctg2.wum.337
Public_nameCre-pigm-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:44:43WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE02146
Other_namecr01.sctg2.wum.337
308 Feb 2019 15:42:26WBPerson1983Name_changeCGC_nameCre-pigm-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpigm
RNASeq_FPKMWBls:000000446.6969From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
49.8235From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
52.9501From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:000002710.9088From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
13.2789From_analysisRNASeq.remanei.WBls:0000027.control_mean
15.0056From_analysisRNASeq.remanei.WBls:0000027.control_median
1.59995From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
19.1025From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
21.5042From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:000003815.4551From_analysisRNASeq.remanei.WBls:0000038.control_mean
18.9599From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
23.8954From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
3.51015From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004136.1503From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
39.3822From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
42.4957From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
43.2576From_analysisRNASeq.remanei.WBls:0000041.control_median
44.0195From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
44.0413From_analysisRNASeq.remanei.WBls:0000041.control_mean
50.274From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
51.9261From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:000010118.9055From_analysisRNASeq.remanei.total_over_all_stages.control_median
23.7083From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00148767
00148768
00148769
00148770
Ortholog (29)
Structured_descriptionAutomated_descriptionPredicted to enable alpha-1,4-mannosyltransferase activity and glycolipid mannosyltransferase activity. Predicted to be involved in GPI anchor biosynthetic process. Predicted to be located in membrane. Is an ortholog of C. elegans pigm-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE02146
Corresponding_transcriptCRE02146.1
Other_sequence (27)
Experimental_infoExpr_patternExpr1093226
Microarray_resultsGPL14146_CRE02146_426-485_0.845_62_C
GPL14146_CRE02146_540-599_0.860_45_B
GPL14146_CRE02146_731-790_0.930_3_A
MethodGene