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WormBase Tree Display for Gene: WBGene00053001

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Name Class

WBGene00053001SMapS_parentSequenceCrem_Contig13
IdentityVersion3
NameCGC_nameCre-myo-5From_analysisInferred_from_orthology
Sequence_nameCRE05479
Molecular_nameCRE05479
CRE05479.1
RP32406
Other_namecr01.sctg1.wum.863
Public_nameCre-myo-5
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
229 Nov 2007 17:00:48WBPerson2970Name_changeCGC_nameCre-myo-5
303 Jul 2008 11:44:39WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE05479
Other_namecr01.sctg1.wum.863
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmyo
RNASeq_FPKMWBls:00000041.49747From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
1.55668From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
1.6159From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:00000270.946878From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
10.2908From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
7.2944From_analysisRNASeq.remanei.WBls:0000027.control_mean
8.15025From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
8.96996From_analysisRNASeq.remanei.WBls:0000027.control_median
9.78968From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:00000381.62461From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
2.75939From_analysisRNASeq.remanei.WBls:0000038.control_mean
3.2391From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
3.41446From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:00000412.53943From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
2.87081From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
4.0252From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
4.32423From_analysisRNASeq.remanei.WBls:0000041.control_median
4.5547From_analysisRNASeq.remanei.WBls:0000041.control_mean
4.62327From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
6.54163From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
6.72788From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:00001014.72335From_analysisRNASeq.remanei.total_over_all_stages.control_mean
4.82949From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00148195
00148196
00148197
00148198
Ortholog (32)
Paralog (28)
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. Is an ortholog of C. elegans myo-5.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE05479
Corresponding_transcriptCRE05479.1
Other_sequence (38)
Experimental_infoExpr_patternExpr1094346
Microarray_resultsGPL14146_CRE05479_4306-4365_0.812_111_C
GPL14146_CRE05479_4621-4680_0.853_58_B
GPL14146_CRE05479_4803-4862_0.659_779_A
MethodGene