WormBase Tree Display for Gene: WBGene00052820

WBGene00052820 SMap: S_parent: Sequence: Crem_Contig5
  Identity: Version: 3
    Name: CGC_name: Cre-cav-2 From_analysis: Inferred_from_orthology
      Sequence_name: CRE27269
      Molecular_name: CRE27269
        CRE27269.1
        RP44046
      Other_name: cr01.sctg1.wum.687
      Public_name: Cre-cav-2
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:25 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:48 WBPerson2970 Name_change: CGC_name: Cre-cav-2
        3 03 Jul 2008 11:44:38 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE27269
                Other_name: cr01.sctg1.wum.687
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cav
    RNASeq_FPKM: WBls:0000004 0.468913 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        0.720209 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.971504 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 10.3887 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        13.6904 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        7.64085 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        7.92999 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        9.01478 From_analysis: RNASeq.remanei.WBls:0000027.control_median
      WBls:0000038 0.235579 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        0.74286 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        0.774951 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        1.21805 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 0.753364 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        1.05636 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        1.2723 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        1.4822 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        1.52185 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        1.6921 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        2.07966 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        2.2773 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 0.211325 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        0.422651 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        0.495722 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        0.669204 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        0.804593 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        2.30786 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        2.66121 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
      WBls:0000101 0.789772 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        1.96969 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00148059
    Ortholog (23)
    Paralog: WBGene00070312 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00075205 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in caveola assembly. Is an ortholog of C. elegans cav-2. In C. elegans, cav-2 is involved in parturition and regulation of egg-laying behavior. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE27269
    Corresponding_transcript: CRE27269.1
    Other_sequence: Dviv_isotig17567
      Name_isotig01757
      Dviv_isotig17566
      FD514542.1
      CSC00825_1
      CJC01659_1
  Experimental_info: Expr_pattern: Expr1101370
    Microarray_results: GPL14146_CRE27269_494-553_0.932_3_A
  Method: Gene