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WormBase Tree Display for Gene: WBGene00052422

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Name Class

WBGene00052422SMapS_parentSequenceCrem_Contig5
IdentityVersion3
NameCGC_nameCre-gana-1From_analysisInferred_from_orthology
Sequence_nameCRE27046
Molecular_nameCRE27046
CRE27046.1
RP23080
Other_namecr01.sctg1.wum.298
Public_nameCre-gana-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
229 Nov 2007 17:00:48WBPerson2970Name_changeCGC_nameCre-gana-1
303 Jul 2008 11:44:34WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE27046
Other_namecr01.sctg1.wum.298
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgana
RNASeq_FPKMWBls:00000044.07399From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
4.35746From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
4.64093From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002714.7019From_analysisRNASeq.remanei.WBls:0000027.control_mean
1.81474From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
18.5458From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
18.8167From_analysisRNASeq.remanei.WBls:0000027.control_median
19.0877From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
19.3592From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:000003830.1605From_analysisRNASeq.remanei.WBls:0000038.control_mean
40.7088From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
44.6537From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
5.11893From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004115.0084From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
17.0862From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
19.5476From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
21.6194From_analysisRNASeq.remanei.WBls:0000041.control_median
22.7092From_analysisRNASeq.remanei.WBls:0000041.control_mean
23.6912From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
30.2311From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
30.6909From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063 (12)
WBls:000010110.1004From_analysisRNASeq.remanei.total_over_all_stages.control_median
13.8491From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00147667
00147668
Ortholog (34)
Structured_descriptionAutomated_descriptionPredicted to enable hydrolase activity, hydrolyzing O-glycosyl compounds. Predicted to be involved in carbohydrate metabolic process. Is an ortholog of C. elegans gana-1. In C. elegans, gana-1 is involved in glycoside catabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE27046
Corresponding_transcriptCRE27046.1
Other_sequence (44)
Experimental_infoExpr_patternExpr1105551
Microarray_resultsGPL14146_CRE27046_775-834_0.926_6_A
MethodGene