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WormBase Tree Display for Gene: WBGene00052272

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Name Class

WBGene00052272SMapS_parentSequenceCrem_Contig5
IdentityVersion3
NameCGC_nameCre-nhr-139From_analysisInferred_from_orthology
Sequence_nameCRE27295
Molecular_nameCRE27295
CRE27295.1
RP40073
Other_namecr01.sctg1.wum.160
Public_nameCre-nhr-139
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
203 Jul 2008 11:44:31WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE27295
Other_namecr01.sctg1.wum.160
304 Jul 2008 11:06:34WBPerson4055Name_changeCGC_nameCre-nhr-139
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000041.63906From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
2.33599From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
3.03293From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:00000270.643991From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
1.50325From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
2.04951From_analysisRNASeq.remanei.WBls:0000027.control_median
2.18391From_analysisRNASeq.remanei.WBls:0000027.control_mean
2.59577From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
3.99263From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:00000380.372624From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
2.83754From_analysisRNASeq.remanei.WBls:0000038.control_mean
3.82315From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
4.31684From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000411.15825From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
1.37497From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
1.43195From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
1.5698From_analysisRNASeq.remanei.WBls:0000041.control_median
1.70765From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
1.78997From_analysisRNASeq.remanei.WBls:0000041.control_mean
1.99712From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
3.06988From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
WBls:0000063 (12)
WBls:00001011.66797From_analysisRNASeq.remanei.total_over_all_stages.control_median
1.86619From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00147495
00147496
00147497
00147498
Ortholog (21)
Paralog (250)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-139.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE27295
Corresponding_transcriptCRE27295.1
Other_sequenceCJC04998_1
Experimental_infoExpr_patternExpr1092701
Microarray_resultsGPL14146_CRE27295_1236-1295_0.894_12_B
GPL14146_CRE27295_1389-1448_0.878_20_C
GPL14146_CRE27295_1695-1754_0.895_11_A
MethodGene