WormBase Tree Display for Gene: WBGene00051653

WBGene00051653 SMap: S_parent: Sequence: Crem_Contig0
  Identity: Version: 3
    Name: CGC_name: Cre-unc-97 From_analysis: Inferred_from_orthology
      Sequence_name: CRE00708
      Molecular_name: CRE00708
        CRE00708.1
        RP06281
      Other_name: cr01.sctg0.wum.644
      Public_name: Cre-unc-97
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:25 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:49 WBPerson2970 Name_change: CGC_name: Cre-unc-97
        3 03 Jul 2008 11:44:26 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE00708
                Other_name: cr01.sctg0.wum.644
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 15.1266 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        18.0455 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        20.9643 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 26.8093 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        55.9597 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        61.3513 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        61.9067 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        62.4622 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        73.2161 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 41.5899 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        68.1234 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        76.2614 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        86.5188 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 16.3896 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        20.8356 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        20.9444 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        26.6876 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        27.399 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        33.8537 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        33.9683 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        34.1341 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (12)
      WBls:0000101 33.911 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        39.2433 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (33)
    Paralog: WBGene00055552 Caenorhabditis remanei From_analysis: TreeFam
            GeneACeDB-Compara
      WBGene00062689 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00074005 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00053657 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00061398 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00060910 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00067120 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00068659 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00068714 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00075545 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Zinc finger, LIM-type; LIM domain; and LIM and senescent cell antigen-like-containing domain protein 1-like. Is an ortholog of C. elegans unc-97. In C. elegans, unc-97 is involved in several processes, including muscle cell cellular homeostasis; positive regulation of sarcomere organization; and sensory perception of mechanical stimulus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE00708
    Corresponding_transcript: CRE00708.1
    Other_sequence: SSC04250_1
      SR02472
      EX540008.1
      HG10805
      SS01718
      MH09730
      CJC02553_1
      AYC04342_1
      JI173023.1
      PPC04435_1
      Oden_isotig18993
      Tcir_isotig07018
      NAC01037_1
      EX565554.1
      TSC02851_1
      BU666427.1
      DQ268534.1
      Dviv_isotig16968
      BU089300.1
      HGC01836_1
      JI475755.1
      TS03805
      EY471294.1
      MH09729
      FC543629.1
      XI03152
      MHC08077_1
      ACC02566_1
      EX540537.1
      HBC18608_1
      MHC09940_1
      BUC02320_1
      Acan_isotig09463
      Tcol_isotig04817
      SSC02191_1
      BXC06087_1
      FC810298.1
      SRC01666_1
      EX012836.1
      BXC01584_1
      AE04454
      CRC08529_1
      CR00950
      ES273167.1
      SS01900
      Dviv_isotig16969
      EX559580.1
      EX560173.1
      EX500502.1
      EY467316.1
      FC815685.1
      XIC02569_1
  Experimental_info: Expr_pattern: Expr1100030
    Microarray_results: GPL14146_CRE00708_408-467_0.903_7_B
      GPL14146_CRE00708_491-550_0.890_10_C
      GPL14146_CRE00708_860-919_0.938_2_A
  Method: Gene