WormBase Tree Display for Gene: WBGene00045297
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| WBGene00045297 | SMap | S_parent | Sequence | C16A11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxc-43 | Person_evidence | WBPerson655 | |||||
| Sequence_name | C16A11.9 | ||||||||
| Molecular_name | C16A11.9 | ||||||||
| C16A11.9.1 | |||||||||
| CE54038 | |||||||||
| Other_name | CELE_C16A11.9 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxc-43 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00045297 | |||||
| NDB | locus_tag | CELE_C16A11.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00045297|UniProtKB=A3KFE7 | |||||||
| family | PTHR31379 | ||||||||
| NCBI | gene | 6418620 | |||||||
| RefSeq | protein | NM_001377780.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322125 | |||||||
| TrEMBL | UniProtAcc | A3KFE7 | |||||||
| UniProt_GCRP | UniProtAcc | A3KFE7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 Feb 2007 15:40:24 | WBPerson1867 | Event | Split_from | WBGene00015819 | ||
| 2 | 17 Jun 2008 14:44:53 | WBPerson2970 | Name_change | CGC_name | fbxc-43 | ||||
| Split_from | WBGene00015819 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxc | ||||||||
| Allele (18) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrII_pilon.g4204 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog (32) | |||||||||
| Structured_description | Automated_description | Enriched in AFD; germ line; germline precursor cell; and head mesodermal cell based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and hsf-1 based on microarray; RNA-seq; and tiling array studies. Is affected by ten chemicals including Alovudine; Zidovudine; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF3557 and Domain of unknown function (DUF3557). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C16A11.9 | |||||||
| Corresponding_CDS_history | C16A11.9:wp274 | ||||||||
| Corresponding_transcript | C16A11.9.1 | ||||||||
| Associated_feature | WBsf987547 | ||||||||
| WBsf1012060 | |||||||||
| Experimental_info | Expr_pattern | Expr1144704 | |||||||
| Expr2011727 | |||||||||
| Expr2029966 | |||||||||
| Drives_construct | WBCnstr00023268 | ||||||||
| Construct_product | WBCnstr00023268 | ||||||||
| Microarray_results | 185370_at | ||||||||
| A_12_P104594 | |||||||||
| Aff_C16A11.6 | |||||||||
| GPL19516_CGZ0004827 | |||||||||
| GPL21109_C16A11.9 | |||||||||
| GPL3518_CE19356 | |||||||||
| GPL8304_CE_WBGene00015819_A | |||||||||
| GPL8673_C16A11_6P01310 | |||||||||
| GPL9450_C16A11.6 | |||||||||
| cea2.i.09059 | |||||||||
| Expression_cluster (115) | |||||||||
| Map_info | Map | II | Position | -5.15999 | Error | 0.046672 | |||
| Positive | Positive_clone | C16A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
