WormBase Tree Display for Gene: WBGene00045295
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| WBGene00045295 | SMap | S_parent | Sequence | Y73B3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-222 | Person_evidence | WBPerson655 | |||||
| Sequence_name | Y73B3A.22 | ||||||||
| Molecular_name | Y73B3A.22 | ||||||||
| Y73B3A.22.1 | |||||||||
| CE53618 | |||||||||
| Other_name | CELE_Y73B3A.22 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | fbxa-222 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00045295 | |||||
| NDB | locus_tag | CELE_Y73B3A.22 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00045295|UniProtKB=A3KFD5 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 6418873 | |||||||
| RefSeq | protein | NM_001374931.2 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | A3KFD5 | |||||||
| UniProt_GCRP | UniProtAcc | A3KFD5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 Feb 2007 14:59:57 | WBPerson1867 | Event | Split_from | WBGene00022217 | ||
| 2 | 01 Mar 2007 11:55:19 | WBPerson2970 | Name_change | CGC_name | fbxa-222 | ||||
| Split_from | WBGene00022217 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (37) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog (224) | |||||||||
| Structured_description | Automated_description | Enriched in head mesodermal cell; neurons; and ventral nerve cord based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; eat-2; and sek-1 based on RNA-seq and microarray studies. Is affected by ten chemicals including Tunicamycin; multi-walled carbon nanotube; and Zidovudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; Mos1 transposase, HTH domain; HTH domain in Mos1 transposase; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y73B3A.22 | |||||||
| Corresponding_CDS_history | Y73B3A.22:wp272 | ||||||||
| Corresponding_transcript | Y73B3A.22.1 | ||||||||
| Other_sequence | CR04821 | ||||||||
| CRC11978_1 | |||||||||
| CR08922 | |||||||||
| CRC09329_1 | |||||||||
| CRC10913_1 | |||||||||
| CRC02600_1 | |||||||||
| CR03107 | |||||||||
| Associated_feature | WBsf1003699 | ||||||||
| WBsf1022053 | |||||||||
| WBsf235244 | |||||||||
| WBsf235245 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00038998 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00058287 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1161702 | ||||||||
| Expr2011529 | |||||||||
| Expr2029766 | |||||||||
| Drives_construct | WBCnstr00023269 | ||||||||
| Construct_product | WBCnstr00023269 | ||||||||
| Microarray_results | 175904_s_at | ||||||||
| A_12_P115550 | |||||||||
| GPL19516_CGZ0053088 | |||||||||
| GPL21109_Y73B3A.22 | |||||||||
| GPL8673_Y73B3A_15P01611 | |||||||||
| GPL8673_Y73B3A_15P01975 | |||||||||
| Expression_cluster (92) | |||||||||
| Map_info | Map | X | Position | -20.972 | |||||
| Positive | Positive_clone | Y73B3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
