WormBase Tree Display for Gene: WBGene00045058
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WBGene00045058 | SMap | S_parent | Sequence | Y71A12B | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | gadr-5 | Person_evidence | WBPerson206 | |||
Sequence_name | Y71A12B.17 | ||||||
Molecular_name | Y71A12B.17a | ||||||
Y71A12B.17a.1 | |||||||
CE47935 | |||||||
Y71A12B.17b | |||||||
CE48003 | |||||||
Y71A12B.17b.1 | |||||||
Other_name | CELE_Y71A12B.17 | Accession_evidence | NDB | BX284601 | |||
Public_name | gadr-5 | ||||||
DB_info | Database | AceView | gene | Y71A12B.17 | |||
WormFlux | gene | WBGene00045058 | |||||
NDB | locus_tag | CELE_Y71A12B.17 | |||||
Panther | gene | CAEEL|WormBase=WBGene00045058|UniProtKB=G3DRG2 | |||||
family | PTHR12904 | ||||||
NCBI | gene | 4927064 | |||||
RefSeq | protein | NM_001265335.3 | |||||
NM_001265336.3 | |||||||
TREEFAM | TREEFAM_ID | TF322626 | |||||
TrEMBL | UniProtAcc | H2KMM0 | |||||
G3DRG2 | |||||||
UniProt_GCRP | UniProtAcc | H2KMM0 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | gadr | ||||||
Allele (103) | |||||||
Strain | WBStrain00033237 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00008969 | ||||||
00008970 | |||||||
Ortholog | WBGene00029320 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | |||
WBGene00142357 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||
WBGene00163592 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||
WBGene00153630 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||
CSP21.g10245 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | ||||
CSP26.g13178 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||
GCK72_020159 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||
OTIPU.nOt.2.0.1.g10089 | Oscheius tipulae | From_analysis | WormBase-Compara | ||||
chrI_pilon.g2824 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00056811 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||
Paralog (32) | |||||||
Structured_description | Automated_description | Predicted to be located in membrane. Predicted to be part of Cul2-RING ubiquitin ligase complex. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y71A12B.17a | |||||
Y71A12B.17b | |||||||
Corresponding_CDS_history | Y71A12B.17:wp229 | ||||||
Corresponding_transcript | Y71A12B.17a.1 | ||||||
Y71A12B.17b.1 | |||||||
Associated_feature | WBsf643825 | ||||||
WBsf657057 | |||||||
WBsf985993 | |||||||
WBsf985994 | |||||||
WBsf985995 | |||||||
WBsf1011148 | |||||||
WBsf218763 | |||||||
Experimental_info | RNAi_result | WBRNAi00021589 | Inferred_automatically | RNAi_primary | |||
Expr_pattern | Expr1015483 | ||||||
Expr1040346 | |||||||
Expr1161551 | |||||||
Expr2011936 | |||||||
Expr2030173 | |||||||
Drives_construct | WBCnstr00023316 | ||||||
Construct_product | WBCnstr00009957 | ||||||
WBCnstr00023316 | |||||||
Microarray_results (14) | |||||||
Expression_cluster (108) | |||||||
Interaction (3) | |||||||
Map_info | Map | I | Position | 22.4419 | Error | 0.02212 | |
Positive | Positive_clone | Y71A12B | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038341 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |