WormBase Tree Display for Gene: WBGene00045058

WBGene00045058 SMap: S_parent: Sequence: Y71A12B
  Identity: Version: 2
    Name: CGC_name: gadr-5 Person_evidence: WBPerson206
      Sequence_name: Y71A12B.17
      Molecular_name: Y71A12B.17a
        Y71A12B.17a.1
        CE47935
        Y71A12B.17b
        CE48003
        Y71A12B.17b.1
      Other_name: CELE_Y71A12B.17 Accession_evidence: NDB BX284601
      Public_name: gadr-5
    DB_info: Database: AceView gene Y71A12B.17
        WormFlux gene WBGene00045058
        NDB locus_tag CELE_Y71A12B.17
        Panther gene CAEEL|WormBase=WBGene00045058|UniProtKB=G3DRG2
          family PTHR12904
        NCBI gene 4927064
        RefSeq protein NM_001265335.3
            NM_001265336.3
        TREEFAM TREEFAM_ID TF322626
        TrEMBL UniProtAcc H2KMM0
            G3DRG2
        UniProt_GCRP UniProtAcc H2KMM0
    Species: Caenorhabditis elegans
    History: Version_change: 1 10 Oct 2006 13:50:25 WBPerson1983 Event: Created
        2 12 Oct 2010 11:39:13 WBPerson2970 Name_change: CGC_name: gadr-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gadr
    Allele: WBVar00094539 Inferred_automatically: From strain object: RB2562
      WBVar00542556
      WBVar01499739
      WBVar01476556
      WBVar00351428
      WBVar00351429
      WBVar00351430
      WBVar00351431
      WBVar00351432
      WBVar00351433
      WBVar00351434
      WBVar00351435
      WBVar00351436
      WBVar00351437
      WBVar02109614
      WBVar02109615
      WBVar01890907
      WBVar01890908
      WBVar02128973
      WBVar01890909
      WBVar01890910
      WBVar02128974
      WBVar01890911
      WBVar01890912
      WBVar01890913
      WBVar01890914
      WBVar00161509
      WBVar02102652
      WBVar00161511
      WBVar01499999
      WBVar00688503
      WBVar00688504
      WBVar00688505
      WBVar00688506
      WBVar00688507
      WBVar00688508
      WBVar00688509
      WBVar00688510
      WBVar00688511
      WBVar01499823
      WBVar01434729
      WBVar00688512
      WBVar00688513
      WBVar01434730
      WBVar00688514
      WBVar00688515
      WBVar00688516
      WBVar00688517
      WBVar00688518
      WBVar00688519
      WBVar00688520
      WBVar00688521
      WBVar00688522
      WBVar00688523
      WBVar00688524
      WBVar02077645
      WBVar00688525
      WBVar00688526
      WBVar02077646
      WBVar00688527
      WBVar00688528
      WBVar00688529
      WBVar00688530
      WBVar00688531
      WBVar00688532
      WBVar00688533
      WBVar00688534
      WBVar00688535
      WBVar00688536
      WBVar02150261
      WBVar00688537
      WBVar00688538
      WBVar02016835
      WBVar02016836
      WBVar00688539
      WBVar02016837
      WBVar00688540
      WBVar02016838
      WBVar00688541
      WBVar01714543
      WBVar00688542
      WBVar01714544
      WBVar00688543
      WBVar01714545
      WBVar00688544
      WBVar00688545
      WBVar01714546
      WBVar00688546
      WBVar01714547
      WBVar00688547
      WBVar01714548
      WBVar01498939
      WBVar01714549
      WBVar00688548
      WBVar01714550
      WBVar00688549
      WBVar01714551
      WBVar01714552
      WBVar01714553
      WBVar01714554
      WBVar01714555
      WBVar01714556
      WBVar00258359
    Strain: WBStrain00033237
    RNASeq_FPKM (74)
    GO_annotation: 00008969
      00008970
    Ortholog: WBGene00029320 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00142357 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00163592 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00153630 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CSP21.g10245 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g13178 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      GCK72_020159 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10089 Oscheius tipulae From_analysis: WormBase-Compara
      chrI_pilon.g2824 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00056811 Caenorhabditis remanei From_analysis: WormBase-Compara
    Paralog (32)
    Structured_description: Automated_description: Predicted to be located in membrane. Predicted to be part of Cul2-RING ubiquitin ligase complex. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y71A12B.17a
      Y71A12B.17b
    Corresponding_CDS_history: Y71A12B.17:wp229
    Corresponding_transcript: Y71A12B.17a.1
      Y71A12B.17b.1
    Associated_feature: WBsf643825
      WBsf657057
      WBsf985993
      WBsf985994
      WBsf985995
      WBsf1011148
      WBsf218763
  Experimental_info: RNAi_result: WBRNAi00021589 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015483
      Expr1040346
      Expr1161551
      Expr2011936
      Expr2030173
    Drives_construct: WBCnstr00023316
    Construct_product: WBCnstr00009957
      WBCnstr00023316
    Microarray_results (14)
    Expression_cluster (108)
    Interaction: WBInteraction000540876
      WBInteraction000540877
      WBInteraction000556336
  Map_info: Map: I Position: 22.4419 Error: 0.02212
    Positive: Positive_clone: Y71A12B Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038341
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene