WormBase Tree Display for Gene: WBGene00044898
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| WBGene00044898 | SMap | S_parent | Sequence | T21G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | let-383 | Person_evidence | WBPerson533 | |||||
| Sequence_name | T21G5.6 | ||||||||
| Molecular_name | T21G5.6 | ||||||||
| T21G5.6.1 | |||||||||
| CE40311 | |||||||||
| T21G5.6.2 | |||||||||
| T21G5.6.3 | |||||||||
| T21G5.6.4 | |||||||||
| T21G5.6.5 | |||||||||
| Other_name | CELE_T21G5.6 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | let-383 | ||||||||
| DB_info | Database | AceView | gene | 1H447 | |||||
| WormFlux | gene | WBGene00044898 | |||||||
| NDB | locus_tag | CELE_T21G5.6 | |||||||
| NCBI | gene | 4926916 | |||||||
| RefSeq | protein | NM_001392488.1 | |||||||
| TrEMBL | UniProtAcc | A4V4W1 | |||||||
| UniProt_GCRP | UniProtAcc | A4V4W1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 05 Jun 2006 08:56:54 | WBPerson1867 | Event | Created | |||
| 2 | 03 Mar 2015 12:55:52 | WBPerson2970 | Event | Acquires_merge | WBGene00002603 | ||||
| Name_change | CGC_name | let-383 | |||||||
| Acquires_merge | WBGene00002603 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | let | ||||||||
| Reference_allele | WBVar00146437 | ||||||||
| Allele (80) | |||||||||
| Legacy_information | [C.elegansII] h115 : early to mid-larval lethal. OA3: h389, h527, h727. [Howell et al. 1987; [McKim et al. 1992; KR] | ||||||||
| Strain | WBStrain00023686 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (16) | |||||||||
| Structured_description | Automated_description | Enriched in germline precursor cell; hypodermis; intestine; and somatic gonad precursor based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including rotenone; Zidovudine; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T21G5.6 | |||||||
| Corresponding_transcript | T21G5.6.1 | ||||||||
| T21G5.6.2 | |||||||||
| T21G5.6.3 | |||||||||
| T21G5.6.4 | |||||||||
| T21G5.6.5 | |||||||||
| Other_sequence | CJC00286_1 | ||||||||
| Dviv_isotig32627 | |||||||||
| Acan_isotig15906 | |||||||||
| Associated_feature | WBsf643409 | ||||||||
| WBsf656455 | |||||||||
| WBsf656456 | |||||||||
| WBsf656457 | |||||||||
| WBsf984015 | |||||||||
| WBsf984016 | |||||||||
| WBsf1009997 | |||||||||
| WBsf217917 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004248 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00082644 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082560 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035770 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025234 | ||||||||
| Expr1040336 | |||||||||
| Expr1157310 | |||||||||
| Drives_construct | WBCnstr00023338 | ||||||||
| Construct_product | WBCnstr00023338 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (130) | |||||||||
| Map_info | Well_ordered | ||||||||
| Positive | Positive_clone | T21G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | 2_point | 2547 | |||||||
| Multi_point | 1033 | ||||||||
| 2141 | |||||||||
| Pos_neg_data | 2703 | ||||||||
| 5074 | |||||||||
| 5353 | |||||||||
| 6168 | |||||||||
| 6542 | |||||||||
| 4173 | |||||||||
| Interpolated_map_position | I | 1.42612 | |||||||
| Reference | WBPaper00000975 | ||||||||
| WBPaper00001557 | |||||||||
| WBPaper00002829 | |||||||||
| WBPaper00003985 | |||||||||
| WBPaper00040589 | |||||||||
| Method | Gene |
