WormBase Tree Display for Gene: WBGene00044469
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WBGene00044469 | SMap | S_parent | Sequence | T26C12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | clec-173 | Person_evidence | WBPerson2531 | |||
Sequence_name | T26C12.6 | ||||||
Molecular_name | T26C12.6 | ||||||
T26C12.6.1 | |||||||
CE38875 | |||||||
Other_name | CELE_T26C12.6 | Accession_evidence | NDB | BX284604 | |||
Public_name | clec-173 | ||||||
DB_info | Database | WormFlux | gene | WBGene00044469 | |||
NDB | locus_tag | CELE_T26C12.6 | |||||
NCBI | gene | 3896782 | |||||
RefSeq | protein | NM_001038345.3 | |||||
TrEMBL | UniProtAcc | Q4R111 | |||||
UniProt_GCRP | UniProtAcc | Q4R111 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele (48) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00028120 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||
WBGene00126708 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||
WBGene00271793 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | ||||
CBOVI.g11167 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||
CSP21.g9529 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | ||||
CSP26.g12394 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||
CSP31.g19741 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||
CSP38.g4142 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||
CSP40.g4190 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||
Cang_2012_03_13_00447.g10960 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||
Cnig_chr_IV.g13663 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||
Csp11.Scaffold630.g21050 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||
Csp5_scaffold_00157.g5870 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||
GCK72_013787 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||
Sp34_40039600 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||
chrIV_pilon.g9931 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00127300 | Caenorhabditis japonica | From_analysis | WormBase-Compara | ||||
WBGene00214395 | Caenorhabditis japonica | From_analysis | WormBase-Compara | ||||
WBGene00067104 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||
Paralog (38) | |||||||
Structured_description | Automated_description | Enriched in head mesodermal cell and intestine based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on RNA-seq; microarray; and proteomic studies. Is affected by fifteen chemicals including Tunicamycin; mianserin; and Cry5B based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T26C12.6 | |||||
Corresponding_transcript | T26C12.6.1 | ||||||
Other_sequence | CBC02230_1 | ||||||
Associated_feature | WBsf667823 | ||||||
Experimental_info | Expr_pattern | Expr1018444 | |||||
Expr1157735 | |||||||
Expr2010095 | |||||||
Expr2028337 | |||||||
Drives_construct | WBCnstr00023536 | ||||||
Construct_product | WBCnstr00023536 | ||||||
Microarray_results (12) | |||||||
Expression_cluster (196) | |||||||
Map_info | Map | IV | Position | -4.94773 | Error | 0.072396 | |
Positive | Positive_clone | T26C12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |