WormBase Tree Display for Gene: WBGene00044340
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WBGene00044340 | SMap | S_parent | Sequence | C03G5 | ||||
---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | ||||||
Name | CGC_name | nspc-5 | Person_evidence | WBPerson655 | ||||
Sequence_name | C03G5.12 | |||||||
Molecular_name | C03G5.12 | |||||||
C03G5.12.1 | ||||||||
CE38677 | ||||||||
Other_name | CELE_C03G5.12 | Accession_evidence | NDB | BX284606 | ||||
Public_name | nspc-5 | |||||||
DB_info | Database | WormFlux | gene | WBGene00044340 | ||||
NDB | locus_tag | CELE_C03G5.12 | ||||||
NCBI | gene | 3564795 | ||||||
RefSeq | protein | NM_001029178.5 | ||||||
TREEFAM | TREEFAM_ID | TF318876 | ||||||
TrEMBL | UniProtAcc | G5EDF2 | ||||||
UniProt_GCRP | UniProtAcc | G5EDF2 | ||||||
Species | Caenorhabditis elegans | |||||||
History | Version_change | 1 | 09 May 2005 17:53:16 | WBPerson1849 | Event | Created | ||
Status | Live | |||||||
Gene_info | Biotype | SO:0001217 | ||||||
Gene_class | nspc | |||||||
Allele (12) | ||||||||
RNASeq_FPKM (74) | ||||||||
Ortholog (259) | ||||||||
Paralog (17) | ||||||||
Structured_description | Automated_description | Enriched in excretory gland cell based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray and RNA-seq studies. Is affected by mianserin and triclosan based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | |||||||
WBPerson37462 | ||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
Molecular_info | Corresponding_CDS | C03G5.12 | ||||||
Corresponding_transcript | C03G5.12.1 | |||||||
Other_sequence | CBC13427_1 | |||||||
Experimental_info | Expr_pattern | Expr1143636 | ||||||
Expr2014474 | ||||||||
Expr2032714 | ||||||||
Drives_construct | WBCnstr00023620 | |||||||
Construct_product | WBCnstr00023620 | |||||||
Microarray_results | A_12_P135190 | |||||||
GPL8673_C03G5_12P00247 | ||||||||
Expression_cluster (62) | ||||||||
Map_info | Map | X | Position | 0.10049 | ||||
Positive | Positive_clone | C03G5 | Inferred_automatically | From sequence, transcript, pseuodgene data | ||||
From sequence, transcript, pseudogene data | ||||||||
Pseudo_map_position | ||||||||
Reference | WBPaper00064841 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |