WormBase Tree Display for Gene: WBGene00044319
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| WBGene00044319 | SMap | S_parent | Sequence | W06E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tag-266 | |||||||
| Sequence_name | W06E11.5 | ||||||||
| Molecular_name | W06E11.5a | ||||||||
| W06E11.5a.1 | |||||||||
| CE26024 | |||||||||
| W06E11.5b | |||||||||
| CE01430 | |||||||||
| W06E11.5b.1 | |||||||||
| Other_name | chic | Accession_evidence | EMBL | AF248541 | |||||
| CELE_W06E11.5 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | tag-266 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 22 Apr 2005 11:55:18 | WBPerson2970 | Event | Created | |||
| 2 | 16 Jun 2006 12:16:17 | WBPerson2970 | Event | Acquires_merge | WBGene00021064 | ||||
| Acquires_merge | WBGene00021064 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tag | ||||||||
| Allele (46) | |||||||||
| Strain | WBStrain00032589 | ||||||||
| WBStrain00036116 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00077616 | ||||||||
| Contained_in_operon | CEOP3028 | ||||||||
| Ortholog (38) | |||||||||
| Structured_description | Concise_description | W06E11.5/tag-266 encodes a cysteine-rich hydrophobic (CHIC) protein orthologous to human CHIC1/BRX and CHIC2/BTL; by orthology to human CHIC2, cysteine residues in the C-terminal CHIC domain of W06E11.5B are predicted to be palmitoylated, and this hydrophobic domain is expected to bind W06E11.5B to Golgi vesicles and the plasma membrane; however, W06E11.5 has no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00032045 | |||||
| WBPaper00032046 | |||||||||
| WBPaper00032047 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 24 Jul 2008 00:00:00 | ||||||||
| Automated_description | Predicted to be located in membrane. Used to study cancer. Human ortholog(s) of this gene implicated in acute myeloid leukemia. Is an ortholog of human CHIC2 (cysteine rich hydrophobic domain 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:162 | Homo sapiens | Paper_evidence | WBPaper00027758 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 13 Mar 2023 00:00:00 | ||||||||
| Potential_model | DOID:9119 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1935) | |||||
| Models_disease_in_annotation | WBDOannot00000204 | ||||||||
| Molecular_info | Corresponding_CDS | W06E11.5a | |||||||
| W06E11.5b | |||||||||
| Corresponding_transcript | W06E11.5a.1 | ||||||||
| W06E11.5b.1 | |||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf650809 | ||||||||
| WBsf655415 | |||||||||
| Experimental_info | RNAi_result (14) | ||||||||
| Expr_pattern | Expr1014583 | ||||||||
| Expr1040223 | |||||||||
| Expr1158437 | |||||||||
| Expr2017253 | |||||||||
| Expr2035389 | |||||||||
| Drives_construct | WBCnstr00023631 | ||||||||
| Construct_product | WBCnstr00023631 | ||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (75) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | III | Position | -26.4018 | Error | 0.011813 | |||
| Positive | Positive_clone | W06E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
