WormBase Tree Display for Gene: WBGene00044315

WBGene00044315 SMap: S_parent: Sequence: F41G3
  Identity: Version: 1
    Name: Sequence_name: F41G3.20
      Molecular_name: F41G3.20
        F41G3.20.1
        CE47953
      Other_name: CELE_F41G3.20 Accession_evidence: NDB BX284602
      Public_name: F41G3.20
    DB_info: Database: AceView gene 2H42
        WormFlux gene WBGene00044315
        NDB locus_tag CELE_F41G3.20
        Panther gene CAEEL|WormBase=WBGene00044315|UniProtKB=Q4TTB5
          family PTHR46219
        NCBI gene 3565874
        RefSeq protein NM_001026986.4
        TREEFAM TREEFAM_ID TF318899
        TrEMBL UniProtAcc Q4TTB5
        UniProt_GCRP UniProtAcc Q4TTB5
    Species: Caenorhabditis elegans
    History: Version_change: 1 21 Apr 2005 09:49:03 WBPerson1867 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (18)
    RNASeq_FPKM (74)
    Ortholog: WBGene00032311 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00054164 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00148547 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00125652 Caenorhabditis japonica From_analysis: OMA
      WBGene00119642 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00095435 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00093729 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00095662 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00100002 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00100517 Pristionchus pacificus From_analysis: Inparanoid_8
      CSP26.g21574 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g12645 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g23492 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g11966 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g3926 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9342 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g4528 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g4539 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g4540 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g22345 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8473 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00004.g338 Caenorhabditis angaria From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12069 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00043.g2315 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_006339 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05464 Oscheius tipulae From_analysis: WormBase-Compara
      chrII_pilon.g4851 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00264988 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog (61)
    Structured_description: Automated_description: Is affected by several genes including daf-2; daf-18; and isp-1 based on tiling array; microarray; and RNA-seq studies. Is affected by eight chemicals including resveratrol; Hydrolyzable Tannins; and Humic Substances based on microarray studies. Is predicted to encode a protein with the following domains: ShK domain-like; CC domain; and ShKT domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F41G3.20
    Corresponding_CDS_history: F41G3.20:wp228
      F41G3.20:wp234
    Corresponding_transcript: F41G3.20.1
    Other_sequence: Dviv_isotig15407
      DVC01677_1
      CJC09220_1
      OOC00621_1
      Oden_isotig18018
      Acan_isotig22919
      EV851478.1
      Dviv_isotig19279
      Dviv_isotig15408
  Experimental_info: RNAi_result: WBRNAi00014766 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020081
      Expr1150890
    Drives_construct: WBCnstr00023635
    Construct_product: WBCnstr00023635
    Microarray_results (14)
    Expression_cluster (60)
  Map_info: Positive: Positive_clone: F41G3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 0.0694782
  Reference: WBPaper00046507
    WBPaper00061876
  Method: Gene