WormBase Tree Display for Gene: WBGene00044161
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| WBGene00044161 | SMap | S_parent | Sequence | C47G2 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 5 | ||||||||
| Name | Sequence_name | C47G2.8 | ||||||||
| Molecular_name | C47G2.8 | |||||||||
| Other_name | CELE_C47G2.8 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | C47G2.8 | |||||||||
| DB_info | Database | WormFlux | gene | WBGene00044161 | ||||||
| NDB | locus_tag | CELE_C47G2.8 | ||||||||
| NCBI | gene | 3564923 | ||||||||
| RefSeq | protein | NR_146640.1 | ||||||||
| RNAcentral | URSid | URS0000B711EF | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 07 Mar 2005 17:58:55 | WBPerson1983 | Event | Created | ||||
| 2 | 17 Oct 2007 09:09:07 | WBPerson1983 | Event | Killed | ||||||
| 3 | 27 May 2010 16:45:47 | WBPerson1983 | Event | Resurrected | ||||||
| 4 | 02 Mar 2017 23:45:43 | WBPerson1983 | Event | Changed_class | CDS | Transcript | ||||
| 5 | 03 Mar 2017 00:18:26 | WBPerson1983 | Event | Acquires_merge | WBGene00044039 | |||||
| Acquires_merge | WBGene00044039 | |||||||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0001263 | ||||||||
| Allele (33) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Structured_description | Automated_description | Enriched in AFD and intestine based on RNA-seq studies. Is affected by several genes including daf-16; dpy-10; and hsf-1 based on RNA-seq and microarray studies. Is affected by eight chemicals including Rifampin; Sirolimus; and Doxycycline based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C47G2.8:wp183 | ||||||||
| C47G2.8:wp258 | ||||||||||
| Corresponding_transcript | C47G2.8 | |||||||||
| Associated_feature | WBsf666134 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019168 | Inferred_automatically | RNAi_primary | ||||||
| Expr_pattern | Expr1146696 | |||||||||
| Microarray_results | 179304_at | |||||||||
| A_12_P140406 | ||||||||||
| GPL19516_CGZ0009587 | ||||||||||
| GPL19516_CGZ0009588 | ||||||||||
| GPL21109_C47G2.7 | ||||||||||
| GPL21109_C47G2.8 | ||||||||||
| GPL8673_T24F1_2P01515 | ||||||||||
| Expression_cluster (50) | ||||||||||
| Map_info | Positive | Positive_clone | C47G2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | II | 3.40494 | ||||||||
| Remark | Un-supported CDS prediction, originally made due to genefinder/twinscan intersect, no supporting data has become available in the years since it's creation so has been deprecated. | Curator_confirmed | WBPerson1983 | |||||||
| New RNAseq now supports a smaller version of this gene prediction. | Curator_confirmed | WBPerson1983 | ||||||||
| Method | Gene |
