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WormBase Tree Display for Gene: WBGene00042912

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Name Class

WBGene00042912SMapS_parentSequencecb25.NA_263
IdentityVersion2
NameCGC_nameCbr-daf-7From_analysisInferred_from_orthology
Sequence_nameCBG24910
Molecular_nameCBG24910
CBG24910.1
CBP13064
Other_nameCBG_24910Accession_evidenceNDBHE601215
Public_nameCbr-daf-7
DB_infoDatabaseNDBlocus_tagCBG_24910
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:12WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-daf-7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdaf
AlleleWBVar00134894
WBVar00134895
WBVar00032994
WBVar00134892
WBVar00134893
WBVar00032989
RNASeq_FPKMWBls:00000023.69577From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
5.47263From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
5.61546From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.67799From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.15829From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
4.5842From_analysisRNASeq.briggsae.WBls:0000002.control_median
5.00117From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.181504From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.709287From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.23707From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.935705From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.38854From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000045.04283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
5.656From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
6.26917From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
5.11848From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
5.14906From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
5.17161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
5.35023From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:000002710.9555From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
14.1216From_analysisRNASeq.briggsae.WBls:0000027.control_mean
27.6606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.74872From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
15.7683From_analysisRNASeq.briggsae.WBls:0000027.control_mean
15.832From_analysisRNASeq.briggsae.WBls:0000027.control_median
20.7085From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003516.0935From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.887959From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.14928From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
15.2719From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.98808From_analysisRNASeq.briggsae.WBls:0000038.control_median
6.03401From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.82688From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000410.530314From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.629827From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.635042From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.640258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.73226From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.12864From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.705104From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.75205From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.76995From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.813308From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.276196From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.450776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.86344From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.16123From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.21242From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.21658From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.963382From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.18683From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.46309From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001013.69577From_analysisRNASeq.briggsae.total_over_all_stages.control_median
8.18885From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.42703From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.40046From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00145851
00145852
Ortholog (44)
ParalogWBGene00030533Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038298Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039598Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040440Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable growth factor activity. Predicted to be located in extracellular region. Is an ortholog of C. elegans daf-7. In C. elegans, daf-7 is involved in several processes, including cellular response to organic substance; regulation of gene expression; and response to bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG24910
Corresponding_CDS_historyCBG24910:bp194
Corresponding_transcriptCBG24910.1
Other_sequence (14)
Experimental_infoExpr_patternExpr1053788
Microarray_resultsGPL8303_CB6_WBGene00042912_A
GPL14143_CBG24910_798-857_0.492_169_A
GPL14143_CBG24910_956-1015_0.696_106_B
GPL14143_CBG24910_1061-1120_0.952_2_C
MethodGene