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WormBase Tree Display for Gene: WBGene00042363

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Name Class

WBGene00042363SMapS_parentSequencecb25.NA_108
IdentityVersion1
NameSequence_nameCBG24195
Molecular_nameCBG24195
CBG24195.1
CBP12784
Other_nameCBG_24195Accession_evidenceNDBHE601517
Public_nameCBG24195
DB_infoDatabaseNDBlocus_tagCBG_24195
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:12WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000212.2856From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
16.0418From_analysisRNASeq.briggsae.WBls:0000002.control_mean
16.1179From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
19.722From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
17.92From_analysisRNASeq.briggsae.WBls:0000002.control_median
34.2095From_analysisRNASeq.briggsae.WBls:0000002.control_mean
88.7126From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000031.11208From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.46535From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.81861From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.16588From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
1.36552From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000043.0563From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
4.71077From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
6.36524From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
2.28899From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
2.69698From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
4.03261From_analysisRNASeq.briggsae.WBls:0000004.control_mean
5.75552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:0000027134.608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
18.256From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.71982From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
51.8613From_analysisRNASeq.briggsae.WBls:0000027.control_mean
168.398From_analysisRNASeq.briggsae.WBls:0000027.control_mean
518.008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
76.432From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:0000035208.313From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038173.842From_analysisRNASeq.briggsae.WBls:0000038.control_median
280.139From_analysisRNASeq.briggsae.WBls:0000038.control_mean
340.173From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
5.37426From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
7.51148From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
767.496From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004113.6935From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
19.5416From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
19.628From_analysisRNASeq.briggsae.WBls:0000041.control_median
19.7144From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
31.2547From_analysisRNASeq.briggsae.WBls:0000041.control_mean
72.0695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
33.7735From_analysisRNASeq.briggsae.WBls:0000041.control_median
39.2639From_analysisRNASeq.briggsae.WBls:0000041.control_mean
47.8326From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
62.7318From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006313.5654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.53453From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.48766From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
7.55811From_analysisRNASeq.briggsae.WBls:0000063.control_mean
8.8309From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
9.37206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
11.362From_analysisRNASeq.briggsae.WBls:0000063.control_mean
30.3813From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
9.10148From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010113.6935From_analysisRNASeq.briggsae.total_over_all_stages.control_median
77.6066From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
14.9057From_analysisRNASeq.briggsae.total_over_all_stages.control_median
79.2149From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (26)
ParalogWBGene00027534Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Tight junction protein, Claudin-like and Tight junction protein, claudin-like. Is an ortholog of C. elegans T24C4.4. In C. elegans, T24C4.4 is involved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG24195
Corresponding_CDS_historyCBG24195:bp194
Corresponding_transcriptCBG24195.1
Other_sequenceCRC07053_1
CR04631
CBC09957_1
CRC06327_1
CJC00926_1
Experimental_infoExpr_patternExpr1060901
Microarray_resultsGPL8303_CB6_WBGene00042363_A
GPL14143_CBG24195_180-239_0.809_29_C
GPL14143_CBG24195_279-338_0.941_2_B
GPL14143_CBG24195_421-480_0.672_49_A
Expression_clusterWBPaper00051137:Santeuil-virus_upregulated_JU1264
WBPaper00058955:heatshock_upregulated_CBG
MethodGene