WormBase Tree Display for Gene: WBGene00042017

WBGene00042017 SMap: S_parent: Sequence: cb25.NA_034
  Identity: Version: 2
    Name: CGC_name: Cbr-unc-63 From_analysis: Inferred_from_orthology
      Sequence_name: CBG23747
      Molecular_name: CBG23747
        CBG23747.1
        CBP13204
      Other_name: CBG_23747 Accession_evidence: NDB HE601040
      Public_name: Cbr-unc-63
    DB_info: Database: NDB locus_tag CBG_23747
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:12 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-unc-63
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000002 4.59643 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        5.21126 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        6.36226 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        9.27909 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        2.58137 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        4.90384 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        5.41704 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.546233 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        1.36172 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        2.17721 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        1.19354 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        1.30566 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 11.8753 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        11.9085 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        11.9416 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        11.7554 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        12.3017 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        13.0612 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        9.59704 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 (12)
      WBls:0000027 0.513297 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        17.4196 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        2.82167 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        6.91819 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        6.29011 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        7.62828 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        9.75855 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 6.47648 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 11.8543 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        1.86959 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        3.7796 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        5.24285 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        6.0524 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        6.7061 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 0.908421 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        1.06863 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        1.20862 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1.34861 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        1.9592 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        4.51113 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        2.92987 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        2.99582 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        4.55215 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        5.58599 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 1.74121 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        1.82134 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        1.874 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        2.05461 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        2.26656 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        3.84164 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        1.48758 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        1.84767 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        2.13673 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 3.84164 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        5.22238 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        4.53164 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        5.56758 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00145262
      00145263
      00145264
      00145265
      00145266
      00145267
      00145268
      00145269
    Ortholog: WBGene00006797 Caenorhabditis elegans From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00072461 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00155461 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00151456 Caenorhabditis brenneri From_analysis: OMA
            WormBase-Compara
      WBGene00127771 Caenorhabditis japonica From_analysis: OMA
      CBOVI.g9216 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g13047 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g9295 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13125 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g10660 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g8440 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15363 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g9534 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g16393 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g14259 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00461.g11125 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-63 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g19718 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01678.g22472 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_12399 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000355 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g11705 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g11803 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10258700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00227537 Brugia malayi From_analysis: WormBase-Compara
      WBGene00228275 Brugia malayi From_analysis: WormBase-Compara
      chrI_pilon.g852 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrI_pilon.g854 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00125622 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00241047 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00248763 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00100131 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00259988 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog (104)
    Structured_description: Automated_description: Predicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans unc-63. In C. elegans, unc-63 is involved in several processes, including calcium ion import across plasma membrane; cholinergic synaptic transmission; and regulation of multicellular organismal process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG23747
    Corresponding_CDS_history: CBG23747:bp194
    Corresponding_transcript: CBG23747.1
    Other_sequence (48)
  Experimental_info: Expr_pattern: Expr1053026
    Microarray_results: GPL8303_CB6_WBGene00042017_A
      GPL8303_CB6_WBGene00042017_B
      GPL14143_CBG23747_1096-1155_0.927_4_C
      GPL14143_CBG23747_1324-1383_0.940_1_B
      GPL14143_CBG23747_1414-1473_0.926_6_A
  Method: Gene