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WormBase Tree Display for Gene: WBGene00041628

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Name Class

WBGene00041628SMapS_parentSequencecb25.fpc4470
IdentityVersion2
NameCGC_nameCbr-sodh-1From_analysisInferred_from_orthology
Sequence_nameCBG23239
Molecular_nameCBG23239
CBG23239.1
CBP12375
Other_nameCBG_23239Accession_evidenceNDBHE601533
Public_nameCbr-sodh-1
DB_infoDatabaseNDBlocus_tagCBG_23239
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-sodh-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsodh
RNASeq_FPKMWBls:0000002107From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
109.12From_analysisRNASeq.briggsae.WBls:0000002.control_mean
145.704From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
74.6567From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
61.4552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
90.8283From_analysisRNASeq.briggsae.WBls:0000002.control_median
97.204From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.382306From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.655266From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.928225From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.436844From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.369392From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.804911From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.24043From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.81704From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.922014From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.926018From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.25719From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002710.5676From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
25.8324From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
33.7074From_analysisRNASeq.briggsae.WBls:0000027.control_mean
64.7221From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
18.2From_analysisRNASeq.briggsae.WBls:0000027.control_median
26.5202From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.95854From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000358.3807From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.7458From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
21.862From_analysisRNASeq.briggsae.WBls:0000038.control_median
22.8971From_analysisRNASeq.briggsae.WBls:0000038.control_mean
30.9782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
37.9787From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.88582From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:0000041106.648From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
57.4523From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
85.1188From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
87.011From_analysisRNASeq.briggsae.WBls:0000041.control_mean
91.9718From_analysisRNASeq.briggsae.WBls:0000041.control_median
98.8249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
102.737From_analysisRNASeq.briggsae.WBls:0000041.control_median
1049.9From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
181.288From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
263.205From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006315.2774From_analysisRNASeq.briggsae.WBls:0000063.control_mean
16.8578From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
17.6686From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
19.6211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
22.2395From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
18.6448From_analysisRNASeq.briggsae.WBls:0000063.control_median
22.5631From_analysisRNASeq.briggsae.WBls:0000063.control_mean
58.9916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010125.8324From_analysisRNASeq.briggsae.total_over_all_stages.control_median
89.5202From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
104.097From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
24.0359From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00144856
Ortholog (32)
Paralog (11)
Structured_descriptionAutomated_descriptionPredicted to enable oxidoreductase activity. Is an ortholog of C. elegans adh-1. In C. elegans, adh-1 is involved in defense response to Gram-positive bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG23239
Corresponding_CDS_historyCBG23239:bp194
Corresponding_transcriptCBG23239.1
Other_sequence (55)
Experimental_infoExpr_patternExpr1069172
Microarray_resultsGPL8303_CB6_WBGene00041628_A
GPL8303_CB6_WBGene00041628_B
GPL14143_CBG23239_607-666_0.912_14_C
GPL14143_CBG23239_838-897_0.740_101_B
GPL14143_CBG23239_955-1014_0.946_3_A
MethodGene