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WormBase Tree Display for Gene: WBGene00040022

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Name Class

WBGene00040022SMapS_parentSequencecb25.fpc4224b
IdentityVersion2
NameCGC_nameCbr-gro-1From_analysisInferred_from_orthology
Sequence_nameCBG21177
Molecular_nameCBG21177
CBG21177.1
CBP46597
Other_nameCBG_21177Accession_evidenceNDBHE600921
Public_nameCbr-gro-1
DB_infoDatabaseNDBlocus_tagCBG_21177
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-gro-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgro
AlleleWBVar00129475
WBVar00129476
WBVar00129477
WBVar00129478
WBVar00129473
WBVar00129474
RNASeq_FPKMWBls:00000023.8972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
4.9214From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.4141From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
5.45289From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
5.10178From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.4335From_analysisRNASeq.briggsae.WBls:0000002.control_median
5.64293From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000034.25431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
5.6081From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
6.96188From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.96041From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
4.72553From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000043.83136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
4.39483From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
4.95831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
3.85605From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
4.52259From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
4.5478From_analysisRNASeq.briggsae.WBls:0000004.control_mean
5.5707From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.275919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.0918From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.45368From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.99332From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.07277From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.6037From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.05375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000355.21157From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000383.66292From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
4.09316From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
4.37462From_analysisRNASeq.briggsae.WBls:0000038.control_median
4.65607From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
4.78317From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.72055From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000414.56304From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
6.5923From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.9792From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
7.14141From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.30362From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
7.52335From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
5.49187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
6.41994From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.65855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
6.81887From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000634.17894From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
5.17103From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
5.91322From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.91647From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
5.92067From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
8.379From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.74692From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
5.54375From_analysisRNASeq.briggsae.WBls:0000063.control_median
5.71884From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001014.88381From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.17103From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.84564From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.06467From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00143518
00143519
00143520
Ortholog (28)
Structured_descriptionAutomated_descriptionPredicted to enable nucleic acid binding activity and zinc ion binding activity. Predicted to be involved in tRNA processing. Is an ortholog of C. elegans gro-1. In C. elegans, gro-1 is involved in determination of adult lifespan and regulation of growth.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG21177
Corresponding_CDS_historyCBG21177:bp194
CBG21177:bp255
Corresponding_transcriptCBG21177.1
Other_sequenceJI175689.1
JI170104.1
JI483563.1
Dviv_isotig15049
HGC05688_1
ASC03818_1
FE908435.1
HG01953
Experimental_infoExpr_patternExpr1051632
Microarray_resultsGPL8303_CB6_WBGene00040022_A
GPL8303_CB6_WBGene00040022_B
GPL14143_CBG21177_825-884_0.920_4_C
GPL14143_CBG21177_1025-1084_0.938_1_A
GPL14143_CBG21177_1126-1185_0.926_3_B
MethodGene