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WormBase Tree Display for Gene: WBGene00039909

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Name Class

WBGene00039909SMapS_parentSequencecb25.fpc4206c
IdentityVersion2
NameCGC_nameCbr-dhps-1From_analysisInferred_from_orthology
Sequence_nameCBG21024
Molecular_nameCBG21024
CBG21024.1
CBP24128
Other_nameCBG_21024Accession_evidenceNDBHE600928
Public_nameCbr-dhps-1
DB_infoDatabaseNDBlocus_tagCBG_21024
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
230 Nov 2011 16:15:35WBPerson2970Name_changeCGC_nameCbr-dhps-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdhps
RNASeq_FPKMWBls:000000213.0943From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
17.603From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
18.7281From_analysisRNASeq.briggsae.WBls:0000002.control_mean
25.4869From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
18.4317From_analysisRNASeq.briggsae.WBls:0000002.control_median
18.8612From_analysisRNASeq.briggsae.WBls:0000002.control_mean
19.2605From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000314.1426From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
19.2362From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
24.3298From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
18.2759From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
18.9161From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000416.8307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
18.4401From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
20.0496From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
17.4537From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
18.5002From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
19.1255From_analysisRNASeq.briggsae.WBls:0000004.control_mean
22.7932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.04211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
24.0257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.58629From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
9.21803From_analysisRNASeq.briggsae.WBls:0000027.control_mean
11.8293From_analysisRNASeq.briggsae.WBls:0000027.control_median
12.1816From_analysisRNASeq.briggsae.WBls:0000027.control_mean
21.0724From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003511.3936From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.1505From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
13.1693From_analysisRNASeq.briggsae.WBls:0000038.control_mean
13.5611From_analysisRNASeq.briggsae.WBls:0000038.control_median
14.9717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
19.8962From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
5.65882From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004118.1322From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
26.4298From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
27.8824From_analysisRNASeq.briggsae.WBls:0000041.control_mean
29.4923From_analysisRNASeq.briggsae.WBls:0000041.control_median
32.5548From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
34.4126From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
22.3842From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
27.919From_analysisRNASeq.briggsae.WBls:0000041.control_mean
33.6003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006315.2346From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
15.8613From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
17.1242From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
18.675From_analysisRNASeq.briggsae.WBls:0000063.control_mean
18.7555From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
26.3995From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
17.2461From_analysisRNASeq.briggsae.WBls:0000063.control_median
17.3681From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
18.4572From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010118.0781From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
18.1322From_analysisRNASeq.briggsae.total_over_all_stages.control_median
18.6278From_analysisRNASeq.briggsae.total_over_all_stages.control_median
18.8151From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00143397
Ortholog (31)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Deoxyhypusine synthase superfamily; Deoxyhypusine synthase; and DHS-like NAD/FAD-binding domain superfamily. Is an ortholog of C. elegans dhps-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG21024
Corresponding_CDS_historyCBG21024:bp194
Corresponding_transcriptCBG21024.1
Other_sequence (32)
Experimental_infoExpr_patternExpr1069302
Microarray_resultsGPL8303_CB6_WBGene00039909_A
GPL8303_CB6_WBGene00039909_B
GPL8303_CB6_WBGene00039909_C
GPL14143_CBG21024_779-838_0.837_3_C
GPL14143_CBG21024_876-935_0.835_4_B
GPL14143_CBG21024_1051-1110_0.717_76_A
MethodGene