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WormBase Tree Display for Gene: WBGene00039347

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Name Class

WBGene00039347SMapS_parentSequencecb25.fpc4180
IdentityVersion1
NameSequence_nameCBG20338
Molecular_nameCBG20338a
CBG20338a.1
CBP46240
CBG20338b
CBP39030
CBG20338b.1
Other_nameCBG_20338Accession_evidenceNDBHE601396
Public_nameCBG20338
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000218.3056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
26.1508From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
28.7247From_analysisRNASeq.briggsae.WBls:0000002.control_mean
41.7178From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
33.9343From_analysisRNASeq.briggsae.WBls:0000002.control_median
37.3028From_analysisRNASeq.briggsae.WBls:0000002.control_mean
63.0371From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000031.82545From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.68519From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
3.54493From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
3.57957From_analysisRNASeq.briggsae.WBls:0000003.control_mean
5.36833From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000411.8753From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
16.5277From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
21.1801From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
13.0633From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
14.1496From_analysisRNASeq.briggsae.WBls:0000004.control_mean
16.9116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
7.71763From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:000002716.335From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
23.5249From_analysisRNASeq.briggsae.WBls:0000027.control_mean
46.8163From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
7.42333From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
28.6627From_analysisRNASeq.briggsae.WBls:0000027.control_mean
30.2056From_analysisRNASeq.briggsae.WBls:0000027.control_median
44.0762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003544.3431From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003819.4203From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
22.9553From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
26.9651From_analysisRNASeq.briggsae.WBls:0000038.control_median
30.026From_analysisRNASeq.briggsae.WBls:0000038.control_mean
30.9749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
46.7536From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:0000041109.438From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
32.3946From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.98545From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
6.11291From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
7.07746From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.04201From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
120.057From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
47.9243From_analysisRNASeq.briggsae.WBls:0000041.control_median
56.2403From_analysisRNASeq.briggsae.WBls:0000041.control_mean
87.8065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006319.2631From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
26.3741From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
27.9043From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
30.3268From_analysisRNASeq.briggsae.WBls:0000063.control_mean
31.2925From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
46.8From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
11.2105From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
27.1392From_analysisRNASeq.briggsae.WBls:0000063.control_median
27.1408From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010126.1508From_analysisRNASeq.briggsae.total_over_all_stages.control_median
29.9111From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
24.553From_analysisRNASeq.briggsae.total_over_all_stages.control_median
32.5439From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (20)
ParalogWBGene00024861Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033104Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041949Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00271168Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans R05D7.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG20338a
CBG20338b
Corresponding_CDS_historyCBG20338:bp194
CBG20338:bp255
Corresponding_transcriptCBG20338a.1
CBG20338b.1
Other_sequence (16)
Experimental_infoMicroarray_resultsGPL8303_CB6_WBGene00039347_A
GPL14143_CBG20338_73-132_0.590_33_C
GPL14143_CBG20338_149-208_0.949_2_A
MethodGene