WormBase Tree Display for Gene: WBGene00039091

WBGene00039091 SMap: S_parent: Sequence: cb25.fpc4152
  Identity: Version: 2
    Name: CGC_name: Cbr-ivd-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG19978
      Molecular_name: CBG19978
        CBG19978.1
        CBP04667
      Other_name: CBG_19978 Accession_evidence: NDB HE601481
      Public_name: Cbr-ivd-1
    DB_info: Database: NDB locus_tag CBG_19978
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:08 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-ivd-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ivd
    RNASeq_FPKM: WBls:0000002 101.057 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        102.509 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        108.268 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        121.238 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        101.783 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        101.888 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        82.7475 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 56.3872 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        58.9515 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        61.5157 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        63.5238 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        72.6686 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 15.0801 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        17.9769 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        20.8737 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        18.9873 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        19.3022 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        19.3072 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        20.3731 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 20.4282 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        56.8917 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        57.1676 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        93.0794 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        170.945 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        75.1235 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        85.4051 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 140.324 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 110.584 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        118.327 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        126.07 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        131.591 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        191.095 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        98.6154 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 107.899 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        136.893 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        138.526 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        140.159 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        151.204 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        219.864 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        158.564 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        164.104 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        176.97 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        202.839 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 102.593 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        104.491 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        106.412 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        112.799 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        118.869 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        168.051 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        109.605 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        125.987 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        161.574 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 103.31 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        106.412 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        103.229 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        105.451 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    GO_annotation: 00142580
      00142581
    Ortholog (34)
    Paralog (22)
    Structured_description: Automated_description: Predicted to enable flavin adenine dinucleotide binding activity and oxidoreductase activity, acting on the CH-CH group of donors. Is an ortholog of C. elegans ivd-1. In C. elegans, ivd-1 is involved in regulation of response to oxidative stress. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG19978
    Corresponding_CDS_history: CBG19978:bp194
    Corresponding_transcript: CBG19978.1
    Other_sequence (77)
  Experimental_info: Expr_pattern: Expr1054160
    Microarray_results: GPL8303_CB6_WBGene00039091_A
      GPL8303_CB6_WBGene00039091_B
      GPL8303_CB6_WBGene00039091_C
      GPL14143_CBG19978_244-303_0.444_234_C
      GPL14143_CBG19978_362-421_0.878_29_B
      GPL14143_CBG19978_499-558_0.914_8_A
    Expression_cluster: WBPaper00059178:Cbr-spr-4(gu163)_downregulated
  Method: Gene