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WormBase Tree Display for Gene: WBGene00039024

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Name Class

WBGene00039024SMapS_parentSequencecb25.fpc4152
IdentityVersion2
NameCGC_nameCbr-bec-1From_analysisInferred_from_orthology
Sequence_nameCBG19886
Molecular_nameCBG19886
CBG19886.1
CBP04654
Other_nameCBG_19886Accession_evidenceNDBHE601481
Public_nameCbr-bec-1
DB_infoDatabaseNDBlocus_tagCBG_19886
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-bec-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbec
RNASeq_FPKMWBls:000000229.1264From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
33.6699From_analysisRNASeq.briggsae.WBls:0000002.control_mean
34.8784From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
37.005From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
35.7048From_analysisRNASeq.briggsae.WBls:0000002.control_mean
35.9417From_analysisRNASeq.briggsae.WBls:0000002.control_median
41.8095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000339.7896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
39.8926From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
39.9955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
36.7231From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
38.8361From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000442.9375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
43.0316From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
43.1256From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
40.0276From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
41.5954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
42.4246From_analysisRNASeq.briggsae.WBls:0000004.control_mean
44.4369From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002713.1564From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
19.8675From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.42192From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
43.0241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
24.6851From_analysisRNASeq.briggsae.WBls:0000027.control_mean
26.1472From_analysisRNASeq.briggsae.WBls:0000027.control_median
39.1381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003523.1669From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003816.9727From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
21.8827From_analysisRNASeq.briggsae.WBls:0000038.control_mean
23.9314From_analysisRNASeq.briggsae.WBls:0000038.control_median
30.8901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
31.8442From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
7.824From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004135.6257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
41.7127From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
41.8876From_analysisRNASeq.briggsae.WBls:0000041.control_median
42.0624From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
42.1274From_analysisRNASeq.briggsae.WBls:0000041.control_mean
49.1089From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
42.1407From_analysisRNASeq.briggsae.WBls:0000041.control_median
42.2189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
42.9454From_analysisRNASeq.briggsae.WBls:0000041.control_mean
46.9436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006316.2388From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
16.5631From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
18.1448From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
18.5923From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
19.0442From_analysisRNASeq.briggsae.WBls:0000063.control_mean
25.6821From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
18.3685From_analysisRNASeq.briggsae.WBls:0000063.control_median
20.2516From_analysisRNASeq.briggsae.WBls:0000063.control_mean
26.2888From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010130.6243From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
34.8784From_analysisRNASeq.briggsae.total_over_all_stages.control_median
32.8233From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
38.0715From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00142528
Ortholog (32)
Structured_descriptionAutomated_descriptionPredicted to be involved in autophagy. Is an ortholog of C. elegans bec-1. In C. elegans, bec-1 is involved in several processes, including determination of adult lifespan; gamete generation; and nematode male tail tip morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19886
Corresponding_CDS_historyCBG19886:bp194
Corresponding_transcriptCBG19886.1
Other_sequence (32)
Experimental_infoExpr_patternExpr1051674
Microarray_resultsGPL8303_CB6_WBGene00039024_A
GPL8303_CB6_WBGene00039024_B
GPL14143_CBG19886_807-866_0.924_3_B
GPL14143_CBG19886_1044-1103_0.664_133_A
GPL14143_CBG19886_1074-1133_0.679_124_C
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
ReferenceWBPaper00038332
MethodGene