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WormBase Tree Display for Gene: WBGene00038535

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Name Class

WBGene00038535SMapS_parentSequencecb25.fpc4126
IdentityVersion2
NameCGC_nameCbr-haao-1From_analysisInferred_from_orthology
Sequence_nameCBG19288
Molecular_nameCBG19288
CBG19288.1
CBP37579
Other_nameCBG_19288Accession_evidenceNDBHE601047
Public_nameCbr-haao-1
DB_infoDatabaseNDBlocus_tagCBG_19288
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
217 Dec 2008 10:29:40WBPerson2970Name_changeCGC_nameCbr-haao-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhaao
RNASeq_FPKMWBls:000000216.7488From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
22.0365From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
22.1711From_analysisRNASeq.briggsae.WBls:0000002.control_mean
27.728From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
12.0402From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
19.3927From_analysisRNASeq.briggsae.WBls:0000002.control_median
19.6384From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.281698From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.563395From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.374266From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.559403From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000045.5227From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
5.70393From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
5.88515From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
4.93817From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
5.9302From_analysisRNASeq.briggsae.WBls:0000004.control_mean
6.4256From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
6.87937From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.862325From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
17.1717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.38096From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
7.47166From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.7763From_analysisRNASeq.briggsae.WBls:0000027.control_median
13.5175From_analysisRNASeq.briggsae.WBls:0000027.control_mean
31.6548From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003537.4618From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038118.494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
20.2577From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
20.2887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
30.3421From_analysisRNASeq.briggsae.WBls:0000038.control_median
40.3955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
49.859From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004114.1097From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
15.49From_analysisRNASeq.briggsae.WBls:0000041.control_mean
15.5819From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
15.6194From_analysisRNASeq.briggsae.WBls:0000041.control_median
15.6568From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
16.6117From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
11.3071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
14.491From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
14.6264From_analysisRNASeq.briggsae.WBls:0000041.control_mean
15.0365From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006315.7927From_analysisRNASeq.briggsae.WBls:0000063.control_mean
16.6265From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
20.1435From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
20.6023From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
21.5912From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
20.3729From_analysisRNASeq.briggsae.WBls:0000063.control_median
20.7292From_analysisRNASeq.briggsae.WBls:0000063.control_mean
45.4118From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010117.1717From_analysisRNASeq.briggsae.total_over_all_stages.control_median
21.6568From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
16.6191From_analysisRNASeq.briggsae.total_over_all_stages.control_median
20.0462From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00142038
00142039
00142040
00142041
Ortholog (26)
Structured_descriptionAutomated_descriptionPredicted to enable 3-hydroxyanthranilate 3,4-dioxygenase activity and iron ion binding activity. Predicted to be located in cytoplasm. Is an ortholog of C. elegans haao-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19288
Corresponding_CDS_historyCBG19288:bp194
CBG19288:bp206
Corresponding_transcriptCBG19288.1
Other_sequence (15)
Experimental_infoExpr_patternExpr1064490
Microarray_resultsGPL8303_CB6_WBGene00038535_A
GPL8303_CB6_WBGene00038535_B
GPL14143_CBG19288_567-626_0.922_4_C
GPL14143_CBG19288_676-735_0.932_2_B
GPL14143_CBG19288_777-836_0.925_3_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene