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WormBase Tree Display for Gene: WBGene00037938

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Name Class

WBGene00037938SMapS_parentSequencecb25.fpc4101
IdentityVersion2
NameCGC_nameCbr-cus-2From_analysisInferred_from_orthology
Sequence_nameCBG18539
Molecular_nameCBG18539
CBG18539.1
CBP30081
Other_nameCBG_18539Accession_evidenceNDBHE601270
Public_nameCbr-cus-2
DB_infoDatabaseNDBlocus_tagCBG_18539
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
222 Dec 2017 13:03:49WBPerson1983Name_changeCGC_nameCbr-cus-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcus
RNASeq_FPKMWBls:000000212.0039From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
25.1868From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
29.4385From_analysisRNASeq.briggsae.WBls:0000002.control_mean
51.1248From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
28.542From_analysisRNASeq.briggsae.WBls:0000002.control_median
30.0532From_analysisRNASeq.briggsae.WBls:0000002.control_mean
31.8972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003117.65From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
139.243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
96.0567From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
108.116From_analysisRNASeq.briggsae.WBls:0000003.control_mean
89.0495From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000435.2632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
39.09From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
42.9169From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
28.8785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
36.5582From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
37.584From_analysisRNASeq.briggsae.WBls:0000004.control_mean
44.303From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002710.3554From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.43043From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.70346From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.1631From_analysisRNASeq.briggsae.WBls:0000027.control_mean
17.1857From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
7.02943From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.16875From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003512.9158From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.08645From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
18.0717From_analysisRNASeq.briggsae.WBls:0000038.control_mean
19.0596From_analysisRNASeq.briggsae.WBls:0000038.control_median
29.4205From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
33.0813From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
8.69867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004145.9869From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
55.4361From_analysisRNASeq.briggsae.WBls:0000041.control_mean
55.5169From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
57.6283From_analysisRNASeq.briggsae.WBls:0000041.control_median
59.7398From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
60.5008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
52.811From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
55.502From_analysisRNASeq.briggsae.WBls:0000041.control_mean
56.9869From_analysisRNASeq.briggsae.WBls:0000041.control_median
58.4569From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006340.8388From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
43.8585From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
50.4236From_analysisRNASeq.briggsae.WBls:0000063.control_mean
53.877From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
56.7422From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
56.8017From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
44.0314From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
48.9542From_analysisRNASeq.briggsae.WBls:0000063.control_median
49.3583From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010133.0813From_analysisRNASeq.briggsae.total_over_all_stages.control_median
35.5382From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
35.9107From_analysisRNASeq.briggsae.total_over_all_stages.control_median
37.7311From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (30)
ParalogWBGene00270831Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: TatSF1-like. Is an ortholog of C. elegans cus-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG18539
Corresponding_CDS_historyCBG18539:bp194
Corresponding_transcriptCBG18539.1
Other_sequenceCRC05767_1
CJC01996_1
CR00417
CBC03638_1
Experimental_infoExpr_patternExpr1065324
Microarray_resultsGPL8303_CB6_WBGene00037938_C
GPL14143_CBG18539_300-359_0.956_3_C
GPL14143_CBG18539_491-550_0.960_2_B
GPL14143_CBG18539_494-553_0.961_1_A
MethodGene