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WormBase Tree Display for Gene: WBGene00037899

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Name Class

WBGene00037899SMapS_parentSequencecb25.fpc4090
IdentityVersion2
NameCGC_nameCbr-oat-1From_analysisInferred_from_orthology
Sequence_nameCBG18488
Molecular_nameCBG18488
CBG18488.1
CBP23760
Other_nameCBG_18488Accession_evidenceNDBHE601532
Public_nameCbr-oat-1
DB_infoDatabaseNDBlocus_tagCBG_18488
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-oat-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classoat
RNASeq_FPKMWBls:00000022.79801From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
4.44226From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
4.91572From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.50688From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.54219From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.62014From_analysisRNASeq.briggsae.WBls:0000002.control_median
4.32233From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.447933From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.542435From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.636937From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.348052From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.477641From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.989288From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.28039From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.57149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
1.43224From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.46708From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.57163From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1.77073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.526251From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.51829From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
16.9714From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6.33865From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.72554From_analysisRNASeq.briggsae.WBls:0000027.control_median
5.93279From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.23718From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000353.45236From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.49812From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
23.2147From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
5.55869From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
5.65983From_analysisRNASeq.briggsae.WBls:0000038.control_median
5.76098From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.00812From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:00000415.34994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
5.94094From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
6.5053From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.52345From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.06967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
7.73326From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
4.92741From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
6.44089From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.62409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000634.86262From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
5.8156From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
5.98872From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
6.56082From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.58747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
9.54967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.06759From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
5.90216From_analysisRNASeq.briggsae.WBls:0000063.control_median
6.31194From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001015.34994From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.47565From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.90941From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.00028From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00141438
00141439
00141440
Ortholog (48)
Paralog (30)
Structured_descriptionAutomated_descriptionPredicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans oat-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG18488
Corresponding_CDS_historyCBG18488:bp194
Corresponding_transcriptCBG18488.1
Other_sequenceEY458354.1
EY472440.1
Tcol_isotig16737
ES409701.1
HBC05415_1
JI255703.1
FC552097.1
CJC02626_1
Experimental_infoExpr_patternExpr1055178
Microarray_resultsGPL8303_CB6_WBGene00037899_A
GPL8303_CB6_WBGene00037899_B
GPL14143_CBG18488_371-430_0.857_45_C
GPL14143_CBG18488_651-710_0.632_184_A
GPL14143_CBG18488_771-830_0.845_53_B
MethodGene