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WormBase Tree Display for Gene: WBGene00037706

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Name Class

WBGene00037706SMapS_parentSequencecb25.fpc4079b
IdentityVersion2
NameCGC_nameCbr-shpk-1From_analysisInferred_from_orthology
Sequence_nameCBG18255
Molecular_nameCBG18255
CBG18255.1
CBP47213
Other_nameCBG_18255Accession_evidenceNDBHE600936
Public_nameCbr-shpk-1
DB_infoDatabaseNDBlocus_tagCBG_18255
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
201 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameCbr-shpk-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classshpk
AlleleWBVar00138724
WBVar00138725
WBVar00138721
WBVar00138722
WBVar00138723
RNASeq_FPKMWBls:00000024.44143From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.51248From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.94289From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
8.15312From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.06957From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
5.69216From_analysisRNASeq.briggsae.WBls:0000002.control_median
5.90175From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000034.1309From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
5.80702From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
7.48314From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
4.98074From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
5.53159From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000042.5146From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
3.2048From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
3.89501From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.8521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
2.21255From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
2.86789From_analysisRNASeq.briggsae.WBls:0000004.control_mean
3.86518From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.18924From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.769887From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.55478From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.7052From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.23754From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.57209From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.62404From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000354.4607From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.9938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.98018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
4.17473From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4.91952From_analysisRNASeq.briggsae.WBls:0000038.control_median
5.85885From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
5.86607From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000414.94953From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
5.19707From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.25624From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.25916From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.26209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
5.32044From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
5.29127From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.65169From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.32459From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
6.79726From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000634.37601From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
5.30059From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
5.58398From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
5.62662From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.99231From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
6.88021From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.78815From_analysisRNASeq.briggsae.WBls:0000063.control_median
5.89855From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.25818From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001014.69313From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.25624From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.71276From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.11849From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00141201
00141202
Ortholog (14)
ParalogWBGene00029053Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032210Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037874Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable kinase activity. Predicted to be involved in carbohydrate metabolic process. Is an ortholog of C. elegans shpk-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG18255
Corresponding_CDS_historyCBG18255:bp194
CBG18255:bp255
Corresponding_transcriptCBG18255.1
Other_sequenceJI175926.1
Experimental_infoExpr_patternExpr1064576
Microarray_resultsGPL8303_CB6_WBGene00037706_A
GPL8303_CB6_WBGene00037706_B
GPL14143_CBG18255_816-875_0.822_83_C
GPL14143_CBG18255_1120-1179_0.946_2_B
GPL14143_CBG18255_1241-1300_0.928_6_A
MethodGene