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WormBase Tree Display for Gene: WBGene00037242

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Name Class

WBGene00037242SMapS_parentSequencecb25.fpc4069d
IdentityVersion2
NameCGC_nameCbr-ntp-1From_analysisInferred_from_orthology
Sequence_nameCBG17677
Molecular_nameCBG17677
CBG17677.1
CBP35523
Other_nameCBG_17677Accession_evidenceNDBHE600976
Public_nameCbr-ntp-1
DB_infoDatabaseNDBlocus_tagCBG_17677
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ntp-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classntp
RNASeq_FPKMWBls:000000210.3599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
12.6788From_analysisRNASeq.briggsae.WBls:0000002.control_mean
13.7048From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
13.9717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
12.7007From_analysisRNASeq.briggsae.WBls:0000002.control_mean
12.7663From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
13.2355From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000325.8074From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
31.7774From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
37.7474From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
32.5396From_analysisRNASeq.briggsae.WBls:0000003.control_mean
34.0641From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000414.9092From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
15.7425From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
16.5758From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
14.0053From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
16.0412From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
16.084From_analysisRNASeq.briggsae.WBls:0000004.control_mean
18.8884From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.150153From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.07028From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
15.0646From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.42834From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.62439From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.1785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
5.11588From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000354.49243From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.15084From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
14.7987From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
6.17114From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
6.25949From_analysisRNASeq.briggsae.WBls:0000038.control_median
6.34785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
7.11713From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004120.5125From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
23.0103From_analysisRNASeq.briggsae.WBls:0000041.control_mean
23.212From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
23.4224From_analysisRNASeq.briggsae.WBls:0000041.control_median
23.6329From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
24.6838From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
23.9613From_analysisRNASeq.briggsae.WBls:0000041.control_mean
24.0515From_analysisRNASeq.briggsae.WBls:0000041.control_median
24.4701From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
27.2568From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006311.3973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
11.8001From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
12.1404From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
13.4014From_analysisRNASeq.briggsae.WBls:0000063.control_mean
13.6443From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
18.0251From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
11.9703From_analysisRNASeq.briggsae.WBls:0000063.control_median
12.6033From_analysisRNASeq.briggsae.WBls:0000063.control_mean
8.61249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010112.1404From_analysisRNASeq.briggsae.total_over_all_stages.control_median
12.3357From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
13.6321From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
13.6746From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00140689
Ortholog (32)
ParalogWBGene00035179Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00032648Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038656Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable hydrolase activity. Is an ortholog of C. elegans ntp-1. In C. elegans, ntp-1 is involved in ribonucleotide metabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG17677
Corresponding_CDS_historyCBG17677:bp194
Corresponding_transcriptCBG17677.1
Other_sequenceBF482122.1
CBC11735_1
CRC03245_1
OVC08611_1
CR01192
CGC00713_1
Experimental_infoExpr_patternExpr1063890
Microarray_resultsGPL8303_CB6_WBGene00037242_A
GPL8303_CB6_WBGene00037242_B
GPL8303_CB6_WBGene00037242_C
GPL14143_CBG17677_182-241_0.692_210_B
GPL14143_CBG17677_516-575_0.897_23_A
GPL14143_CBG17677_1025-1084_0.929_8_C
MethodGene