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WormBase Tree Display for Gene: WBGene00036594

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Name Class

WBGene00036594SMapS_parentSequencecb25.fpc4044b2
IdentityVersion2
NameCGC_nameCbr-sto-1From_analysisInferred_from_orthology
Sequence_nameCBG16729
Molecular_nameCBG16729
CBG16729.1
CBP45512
Other_nameCBG_16729Accession_evidenceNDBHE600942
Public_nameCbr-sto-1
DB_infoDatabaseNDBlocus_tagCBG_16729
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-sto-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsto
RNASeq_FPKMWBls:00000026.27623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
7.93125From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.10725From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
9.41027From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
15.0779From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
8.75876From_analysisRNASeq.briggsae.WBls:0000002.control_median
9.71791From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000320.4642From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
40.0784From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
59.6927From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
24.7767From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
34.9779From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004180.108From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
190.985From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
201.862From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
189.499From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
197.235From_analysisRNASeq.briggsae.WBls:0000004.control_mean
202.145From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
212.562From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002715.5172From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
15.9784From_analysisRNASeq.briggsae.WBls:0000027.control_mean
27.3401From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.07806From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
15.5365From_analysisRNASeq.briggsae.WBls:0000027.control_median
15.5558From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
15.8728From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003513.6787From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.657From_analysisRNASeq.briggsae.WBls:0000038.control_median
14.2533From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.04328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.18067From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
23.1333From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
29.656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004110.4778From_analysisRNASeq.briggsae.WBls:0000041.control_mean
23.7321From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
4.68769From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
5.45139From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
6.74576From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.04012From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
11.3033From_analysisRNASeq.briggsae.WBls:0000041.control_median
13.3342From_analysisRNASeq.briggsae.WBls:0000041.control_mean
14.5665From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
23.5271From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.86749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.13043From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.18578From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.38071From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
3.71983From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.15811From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.57316From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.53543From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010124.0322From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.10725From_analysisRNASeq.briggsae.total_over_all_stages.control_median
11.894From_analysisRNASeq.briggsae.total_over_all_stages.control_median
36.7679From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00140007
00140008
Contained_in_operonCBOPA0406
Ortholog (29)
ParalogWBGene00029931Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035084Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035201Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036256Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036958Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036959Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036961Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037283Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042595Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in plasma membrane. Is an ortholog of C. elegans sto-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16729
Corresponding_CDS_historyCBG16729:bp194
CBG16729:bp255
Corresponding_transcriptCBG16729.1
Other_sequenceGRC00088_1
CJC17053_1
Experimental_infoExpr_patternExpr1059570
Microarray_resultsGPL8303_CB6_WBGene00036594_A
GPL8303_CB6_WBGene00036594_B
GPL14143_CBG16729_798-857_0.846_3_C
GPL14143_CBG16729_865-924_0.773_17_A
GPL14143_CBG16729_960-1019_0.875_1_B
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
MethodGene