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WormBase Tree Display for Gene: WBGene00036426

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Name Class

WBGene00036426SMapS_parentSequencecb25.fpc4044a
IdentityVersion2
NameCGC_nameCbr-ubc-18From_analysisInferred_from_orthology
Sequence_nameCBG16512
Molecular_nameCBG16512
CBG16512.1
CBP04028
Other_nameCBG_16512Accession_evidenceNDBHE600949
Public_nameCbr-ubc-18
DB_infoDatabaseNDBlocus_tagCBG_16512
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ubc-18
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classubc
RNASeq_FPKMWBls:0000002142.448From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
157.847From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
165.498From_analysisRNASeq.briggsae.WBls:0000002.control_mean
196.199From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
177.023From_analysisRNASeq.briggsae.WBls:0000002.control_median
182.327From_analysisRNASeq.briggsae.WBls:0000002.control_mean
232.813From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003350.066From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
374.88From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
399.695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
345.485From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
365.082From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004248.193From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
252.998From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
257.803From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
228.992From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
239.937From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
259.094From_analysisRNASeq.briggsae.WBls:0000004.control_mean
320.545From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002714.6253From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
34.6165From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.33135From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
82.8928From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
45.9201From_analysisRNASeq.briggsae.WBls:0000027.control_mean
47.2281From_analysisRNASeq.briggsae.WBls:0000027.control_median
79.8308From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035108.035From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038101.12From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
106.233From_analysisRNASeq.briggsae.WBls:0000038.control_median
111.346From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
126.255From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
60.8691From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
99.8975From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:0000041225.802From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
254.323From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
258.022From_analysisRNASeq.briggsae.WBls:0000041.control_mean
264.616From_analysisRNASeq.briggsae.WBls:0000041.control_median
274.909From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
277.054From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
266.446From_analysisRNASeq.briggsae.WBls:0000041.control_mean
271.357From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
273.133From_analysisRNASeq.briggsae.WBls:0000041.control_median
295.232From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063127.474From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
129.459From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
137.411From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
164.747From_analysisRNASeq.briggsae.WBls:0000063.control_mean
189.116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
240.273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
157.799From_analysisRNASeq.briggsae.WBls:0000063.control_median
166.987From_analysisRNASeq.briggsae.WBls:0000063.control_mean
178.187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:0000101137.411From_analysisRNASeq.briggsae.total_over_all_stages.control_median
161.279From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
180.775From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
182.777From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (29)
ParalogWBGene00024015Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025333Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028348Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Ubiquitin-conjugating enzyme/RWD-like; Ubiquitin-conjugating enzyme E2; and Ubiquitin-conjugating enzyme. Is an ortholog of C. elegans ubc-18. In C. elegans, ubc-18 is involved in determination of adult lifespan; embryonic digestive tract morphogenesis; and protein metabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16512
Corresponding_CDS_historyCBG16512:bp194
Corresponding_transcriptCBG16512.1
Other_sequence (76)
Experimental_infoExpr_patternExpr1067797
Microarray_resultsGPL8303_CB6_WBGene00036426_A
GPL8303_CB6_WBGene00036426_B
GPL14143_CBG16512_67-126_0.906_15_B
GPL14143_CBG16512_220-279_0.945_3_C
GPL14143_CBG16512_379-438_0.972_1_A
MethodGene