Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00036404

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00036404SMapS_parentSequencecb25.fpc4044a
IdentityVersion3
NameCGC_nameCbr-abu-13From_analysisInferred_from_orthology
Sequence_nameCBG16482
Molecular_nameCBG16482
CBG16482.1
CBP47252
Other_nameCbr-pqn-46From_analysisInferred_from_orthology
CBG_16482Accession_evidenceNDBHE600949
Public_nameCbr-abu-13
DB_infoDatabaseNDBlocus_tagCBG_16482
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-pqn-46
312 Apr 2011 11:53:07WBPerson2970Name_changeCGC_nameCbr-abu-13
Other_nameCbr-pqn-46
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classabu
AlleleWBVar00123999
WBVar00124000
WBVar00018819
RNASeq_FPKMWBls:000000258.9544From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
60.4758From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
63.5999From_analysisRNASeq.briggsae.WBls:0000002.control_mean
71.3696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
26.9748From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
54.4436From_analysisRNASeq.briggsae.WBls:0000002.control_mean
59.7151From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000311.2683From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.99896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
20.5376From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
10.4439From_analysisRNASeq.briggsae.WBls:0000003.control_mean
8.79528From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000489.3847From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
92.6762From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
95.9678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
114.635From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
91.1678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
91.3431From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
96.4997From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:0000027217.403From_analysisRNASeq.briggsae.WBls:0000027.control_mean
37.8654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
535.919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
78.4233From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
100.764From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
188.243From_analysisRNASeq.briggsae.WBls:0000027.control_mean
89.5937From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003587.9156From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038105.212From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
201.237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
35.413From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
52.3104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
78.7612From_analysisRNASeq.briggsae.WBls:0000038.control_median
98.5431From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004111.715From_analysisRNASeq.briggsae.WBls:0000041.control_mean
31.0389From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.66264From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.67586From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
6.0793From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.48273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
10.2796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
11.5496From_analysisRNASeq.briggsae.WBls:0000041.control_mean
12.158From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
9.38116From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006310.5585From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
11.1841From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
12.7005From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
13.9914From_analysisRNASeq.briggsae.WBls:0000063.control_mean
25.8333From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
9.68047From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
10.8713From_analysisRNASeq.briggsae.WBls:0000063.control_median
12.3916From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.3929From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010131.0389From_analysisRNASeq.briggsae.total_over_all_stages.control_median
60.8003From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
29.0068From_analysisRNASeq.briggsae.total_over_all_stages.control_median
58.5189From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (27)
Structured_descriptionAutomated_descriptionIs affected by Cbr-htz-1 based on RNA-seq studies. Is an ortholog of C. elegans abu-13.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16482
Corresponding_CDS_historyCBG16482:bp194
CBG16482:bp255
Corresponding_transcriptCBG16482.1
Other_sequence (16)
Experimental_infoExpr_patternExpr1069177
Microarray_resultsGPL8303_CB6_WBGene00036404_A
GPL8303_CB6_WBGene00036404_B
GPL14143_CBG16482_1099-1158_0.936_11_B
GPL14143_CBG16482_1284-1343_0.945_7_A
GPL14143_CBG16482_1408-1467_0.966_2_C
Expression_clusterWBPaper00059178:Cbr-htz-1(gu167)_downregulated
MethodGene