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WormBase Tree Display for Gene: WBGene00036289

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Name Class

WBGene00036289SMapS_parentSequencecb25.fpc4033c
IdentityVersion2
NameCGC_nameCbr-ceh-36From_analysisInferred_from_orthology
Sequence_nameCBG16311
Molecular_nameCBG16311a
CBG16311a.1
CBP10218
CBG16311b
CBP41248
CBG16311b.1
Other_nameCBG_16311Accession_evidenceNDBHE600961
Public_nameCbr-ceh-36
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ceh-36
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classceh
RNASeq_FPKMWBls:00000020.125274From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.29493From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.37675From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.38276From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.841546From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.93158From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.10915From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000384.2448From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
91.2305From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
98.2161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
65.7223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
82.7277From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000455.6956From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
55.9566From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
56.2176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
60.9382From_analysisRNASeq.briggsae.WBls:0000004.control_mean
61.3192From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
65.5186From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
65.9402From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.302793From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.51099From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.648518From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.13177From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.82138From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.04923From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.25135From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000352.49625From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.195369From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.311877From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.701708From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.840199From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.09154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.76201From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.319235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.05008From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.09779From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.2027From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.3076From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.47571From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.192163From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.577796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.828382From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.837793From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000630.106616From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.154599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.37848From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.077299From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.187054From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.589246From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010111.3059From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.13177From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.21968From_analysisRNASeq.briggsae.total_over_all_stages.control_median
15.548From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139683
Ortholog (12)
Paralog (20)
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Is an ortholog of C. elegans ceh-36. In C. elegans, ceh-36 is involved in neuron fate specification; positive regulation of transcription by RNA polymerase II; and sensory perception of chemical stimulus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16311a
CBG16311b
Corresponding_CDS_historyCBG16311:bp194
CBG16311:bp255
Corresponding_transcriptCBG16311a.1
CBG16311b.1
Other_sequenceOOC03311_1
CRC06706_1
Dviv_isotig18862
CR03746
Dviv_isotig18863
Experimental_infoExpr_patternExpr1069860
Microarray_resultsGPL8303_CB6_WBGene00036289_A
GPL8303_CB6_WBGene00036289_B
GPL8303_CB6_WBGene00036289_C
GPL8303_CB6_WBGene00036289_D
GPL8303_CB6_WBGene00036289_E
GPL14143_CBG16311_411-470_0.780_30_B
GPL14143_CBG16311_659-718_0.736_45_C
GPL14143_CBG16311_916-975_0.883_3_A
MethodGene