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WormBase Tree Display for Gene: WBGene00036144

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Name Class

WBGene00036144SMapS_parentSequencecb25.fpc4033c
IdentityVersion4
NameCGC_nameCbr-gpx-5From_analysisInferred_from_orthology
Sequence_nameCBG16081
Molecular_nameCBG16081
CBG16081.1
CBP03867
Other_nameCBG_16081Accession_evidenceNDBHE600961
Public_nameCbr-gpx-5
DB_infoDatabaseNDBlocus_tagCBG_16081
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
220 Jul 2012 14:22:06WBPerson2970Name_changeCGC_nameCbr-gpx-5
308 Feb 2019 15:42:27WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:26WBPerson1983Name_changeCGC_nameCbr-gpx-5
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCbr-gpx-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgpx
RNASeq_FPKMWBls:000000252.8166From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
74.7126From_analysisRNASeq.briggsae.WBls:0000002.control_mean
80.438From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
90.8833From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
46.6583From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
66.6273From_analysisRNASeq.briggsae.WBls:0000002.control_median
67.6991From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.450102From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.09893From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
3.74776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.72776From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
1.97521From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000414.2395From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
15.7626From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
17.2858From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
15.9185From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
16.2211From_analysisRNASeq.briggsae.WBls:0000004.control_mean
16.5321From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
17.1297From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002724.2725From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
48.729From_analysisRNASeq.briggsae.WBls:0000027.control_mean
59.2105From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
62.704From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
106.475From_analysisRNASeq.briggsae.WBls:0000027.control_mean
279.711From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
60.9572From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003530.615From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038103.957From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
116.43From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
49.7005From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
58.7814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
81.3692From_analysisRNASeq.briggsae.WBls:0000038.control_median
82.2172From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004124.2932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
33.8095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
34.2668From_analysisRNASeq.briggsae.WBls:0000041.control_median
34.724From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
46.5773From_analysisRNASeq.briggsae.WBls:0000041.control_mean
93.4824From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
44.9846From_analysisRNASeq.briggsae.WBls:0000041.control_median
53.5846From_analysisRNASeq.briggsae.WBls:0000041.control_mean
55.2451From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
79.9535From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
37.2882From_analysisRNASeq.briggsae.WBls:0000063.control_mean
40.5521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
44.4344From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
47.6583From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
53.7961From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
38.5808From_analysisRNASeq.briggsae.WBls:0000063.control_mean
44.7393From_analysisRNASeq.briggsae.WBls:0000063.control_median
45.0441From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010146.8312From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
47.6583From_analysisRNASeq.briggsae.total_over_all_stages.control_median
45.8512From_analysisRNASeq.briggsae.total_over_all_stages.control_median
50.4217From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139515
00139516
Ortholog (28)
ParalogWBGene00024794Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026582Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036143Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036635Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039790Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable glutathione peroxidase activity. Predicted to be involved in response to oxidative stress. Is an ortholog of C. elegans gpx-5. In C. elegans, gpx-5 is involved in response to reactive oxygen species.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16081
Corresponding_CDS_historyCBG16081:bp194
Corresponding_transcriptCBG16081.1
Other_sequence (72)
Experimental_infoExpr_patternExpr1052880
Microarray_resultsGPL8303_CB6_WBGene00036144_A
GPL14143_CBG16081_324-383_0.744_49_C
GPL14143_CBG16081_378-437_0.885_4_B
GPL14143_CBG16081_539-598_0.848_16_A
Remark[190208 pad] The CGC name Cbr-gpx-5 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Cbr-gpx-5 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene