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WormBase Tree Display for Gene: WBGene00035722

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Name Class

WBGene00035722SMapS_parentSequencecb25.fpc4023
IdentityVersion2
NameCGC_nameCbr-ifd-1From_analysisInferred_from_orthology
Sequence_nameCBG15464
Molecular_nameCBG15464
CBG15464.1
CBP26658
Other_nameCBG_15464Accession_evidenceNDBHE601046
Public_nameCbr-ifd-1
DB_infoDatabaseNDBlocus_tagCBG_15464
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-ifd-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classifd
RNASeq_FPKMWBls:000000217.4532From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
21.5959From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
26.5956From_analysisRNASeq.briggsae.WBls:0000002.control_mean
40.7376From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
11.1385From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
19.5245From_analysisRNASeq.briggsae.WBls:0000002.control_median
22.7313From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.153807From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.96089From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
5.76797From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
4.03232From_analysisRNASeq.briggsae.WBls:0000003.control_mean
6.17519From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000427.1547From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
27.2427From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
27.3307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
25.0952From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
25.1489From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
26.2947From_analysisRNASeq.briggsae.WBls:0000004.control_mean
26.7439From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002720.0704From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.08582From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
50.0867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
8.03877From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
29.0627From_analysisRNASeq.briggsae.WBls:0000027.control_median
32.1984From_analysisRNASeq.briggsae.WBls:0000027.control_mean
68.5824From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003522.199From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003814.88From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
46.4083From_analysisRNASeq.briggsae.WBls:0000038.control_mean
48.6216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
49.1525From_analysisRNASeq.briggsae.WBls:0000038.control_median
49.6834From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
72.4481From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000411.98091From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.55545From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.92105From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.25115From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.28665From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
5.18161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.50956From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
1.62789From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
2.26818From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.69035From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006315.594From_analysisRNASeq.briggsae.WBls:0000063.control_mean
18.2059From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
18.8438From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
19.9981From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
20.9223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
13.6592From_analysisRNASeq.briggsae.WBls:0000063.control_mean
18.5249From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.9848From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010119.9981From_analysisRNASeq.briggsae.total_over_all_stages.control_median
22.8593From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
19.4209From_analysisRNASeq.briggsae.total_over_all_stages.control_median
21.9191From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (24)
Paralog (13)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Lamin tail domain; Lamin tail domain superfamily; Lamin Tail Domain; Intermediate filament, rod domain; and Intermediate filament protein. Is an ortholog of C. elegans ifd-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG15464
Corresponding_CDS_historyCBG15464:bp194
Corresponding_transcriptCBG15464.1
Other_sequenceCR05859
CRC09035_1
Experimental_infoExpr_patternExpr1062861
Microarray_resultsGPL8303_CB6_WBGene00035722_A
GPL8303_CB6_WBGene00035722_B
GPL14143_CBG15464_1242-1301_0.789_10_C
GPL14143_CBG15464_1424-1483_0.699_96_B
GPL14143_CBG15464_1584-1643_0.442_258_A
MethodGene