WormBase Tree Display for Gene: WBGene00035711

WBGene00035711 SMap: S_parent: Sequence: cb25.fpc4023
  Identity: Version: 2
    Name: CGC_name: Cbr-unc-27 From_analysis: Inferred_from_orthology
      Sequence_name: CBG15446
      Molecular_name: CBG15446
        CBG15446.1
        CBP40893
      Other_name: CBG_15446 Accession_evidence: NDB HE601046
      Public_name: Cbr-unc-27
    DB_info: Database: NDB locus_tag CBG_15446
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:05 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 15 Oct 2007 15:19:45 WBPerson2970 Name_change: CGC_name: Cbr-unc-27
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000002 1052.41 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        529.099 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        822.609 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        886.317 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        614.422 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        750.37 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        770.562 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 20.453 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        2.84869 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        38.0574 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        26.1496 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        37.5426 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 138.629 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        139.335 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        140.042 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        134.015 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        153.504 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        162.722 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        192.111 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 107.498 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        293.955 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        316.326 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        547.524 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        420.74 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        435.207 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        791.853 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 816.682 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 1012.61 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        1208.63 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        622.204 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        824.203 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        916.912 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        918.406 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
      WBls:0000041 305.801 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        511.148 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        513.843 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        516.537 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        541.95 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        834.313 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        249.469 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        513.39 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        663.069 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        355.873 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        413.859 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        434.265 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        442.639 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        488.602 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        434.92 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        438.452 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        830.154 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 505.374 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        511.148 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        482.4 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        508.543 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    GO_annotation: 00139174
    Ortholog (36)
    Paralog: WBGene00037002 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00039178 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042489 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be part of troponin complex. Is an ortholog of C. elegans unc-27. In C. elegans, unc-27 is involved in locomotion and sarcomere organization. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG15446
    Corresponding_CDS_history: CBG15446:bp194
      CBG15446:bp255
    Corresponding_transcript: CBG15446.1
    Other_sequence: FD515120.1
      GW406631.1
      SSC03968_1
      FD515832.1
      AS14582
      BE346032.1
      TCC00272_1
      AW980145.1
      MHC01951_1
      PTC03639_1
      HS01322
      SSC01171_1
      PPC00959_1
      HBC00529_1
      ES744332.1
      AI130088.1
      AI124144.1
      ES409608.1
      CSC00558_1
      HC04422
      BE552480.1
      AW288221.1
      HG00555
      ZP00041
      AI124143.1
      GE638413.1
      AW980277.1
      Tcol_isotig22041
      AS02566
      BU586957.1
      CRC05830_1
      TMC01431_1
      EX541370.1
      AA294738.1
      MJ00459
      ZPC00008_1
      CJC15537_1
      MH02705
      Hbac_isotig02896
      HC01929
      ES412726.1
      OOC00679_1
      Oden_isotig17886
      BE125002.1
      BUC00547_1
      ES412110.1
      OVC04395_1
      TCC00271_1
      EX009089.1
      HS00182
      FD514317.1
      PSC02079_1
      HGC07425_1
      Dviv_isotig23534
      HSC01074_1
      ACC00248_1
      EX912386.1
      TX00161
      ES413308.1
      ES411573.1
      ES744159.1
      JI180422.1
      GRC01522_1
      EX543174.1
      PPC05300_1
      PT04096
      JO467657.1
      ES410355.1
      BE636492.1
      AW208333.1
      FG581440.1
      TM01730
      AI096016.1
      ASC11232_1
      PT00350
      ES409523.1
      AW257582.1
      CBC01355_1
      AI124149.1
      CK854772.1
      PPC09497_1
      WBC02194_1
      CJC02979_1
      ES743461.1
      CJC00377_1
      AA915841.1
      BE346047.1
      R95399.1
      AA720438.1
      Acan_isotig06985
      CR01985
      ALC00979_1
      AI130355.1
      EX008899.1
      EX547172.1
      GE639475.1
      AW682845.1
      FD515046.1
      FG620593.1
      BE132491.1
      NB06625
      Name_isotig03735
      NBC00246_1
      BE132624.1
      ASC00790_1
      EX007703.1
      EX910802.1
      BXC00029_1
      AS12483
      BXC01343_1
      SS01499
      TX00860
  Experimental_info: Expr_pattern: Expr1051683
    Microarray_results: GPL8303_CB6_WBGene00035711_A
      GPL8303_CB6_WBGene00035711_B
      GPL14143_CBG15446_58-117_0.854_7_C
      GPL14143_CBG15446_194-253_0.855_6_B
      GPL14143_CBG15446_586-645_0.898_1_A
  Method: Gene