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WormBase Tree Display for Gene: WBGene00035416

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Name Class

WBGene00035416SMapS_parentSequencecb25.fpc3857c2
IdentityVersion2
NameCGC_nameCbr-rab-28From_analysisInferred_from_orthology
Sequence_nameCBG15075
Molecular_nameCBG15075
CBG15075.1
CBP25834
Other_nameCBG_15075Accession_evidenceNDBHE600932
Public_nameCbr-rab-28
DB_infoDatabaseNDBlocus_tagCBG_15075
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-rab-28
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrab
RNASeq_FPKMWBls:00000020.84573From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.38261From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.38738From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.93381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.117832From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.07From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.11417From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.179664From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.10657From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.03347From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.19694From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.37768From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000047.36505From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
7.87924From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
8.39344From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
5.12712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
5.7566From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
6.93018From_analysisRNASeq.briggsae.WBls:0000004.control_mean
8.00871From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.153529From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.363501From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.941557From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.30764From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.07137From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.15098From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.77924From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.64996From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.20453From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.31172From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.59635From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.98817From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.05416From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.111671From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.14245From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.305147From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.467845From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.630401From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.79964From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.13374From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.14956From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.88654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
2.48921From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.22582From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.319092From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.607149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.762492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.11291From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.26591From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001011.20453From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.8593From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.51628From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.11744From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138882
00138883
Contained_in_operonCBOPA0958
Ortholog (18)
Paralog (31)
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans rab-28. In C. elegans, rab-28 is involved in several processes, including axoneme assembly; locomotory exploration behavior; and regulation of cilium assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG15075
Corresponding_CDS_historyCBG15075:bp194
Corresponding_transcriptCBG15075.1
Other_sequence (13)
Experimental_infoExpr_patternExpr1067339
Microarray_resultsGPL8303_CB6_WBGene00035416_A
GPL14143_CBG15075_284-343_0.928_8_B
GPL14143_CBG15075_530-589_0.956_1_A
GPL14143_CBG15075_600-659_0.862_38_C
MethodGene