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WormBase Tree Display for Gene: WBGene00034622

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Name Class

WBGene00034622SMapS_parentSequencecb25.fpc3835
IdentityVersion2
NameCGC_nameCbr-jtr-1From_analysisInferred_from_orthology
Sequence_nameCBG13945
Molecular_nameCBG13945
CBG13945.1
CBP03373
Other_nameCBG_13945Accession_evidenceNDBHE601467
Public_nameCbr-jtr-1
DB_infoDatabaseNDBlocus_tagCBG_13945
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-jtr-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classjtr
RNASeq_FPKMWBls:000000210.4127From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
12.361From_analysisRNASeq.briggsae.WBls:0000002.control_mean
18.2876From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
8.38263From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
14.3502From_analysisRNASeq.briggsae.WBls:0000002.control_median
15.3027From_analysisRNASeq.briggsae.WBls:0000002.control_mean
24.1278From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000315.2749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
17.9764From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
20.6778From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
18.7605From_analysisRNASeq.briggsae.WBls:0000003.control_mean
20.3289From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000422.4431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
23.0164From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
23.5897From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
26.0426From_analysisRNASeq.briggsae.WBls:0000004.control_mean
26.3692From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
27.4803From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
30.3306From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.379583From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
15.3652From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.55888From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6.43455From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.57904From_analysisRNASeq.briggsae.WBls:0000027.control_median
5.59921From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.22572From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000359.37979From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.1316From_analysisRNASeq.briggsae.WBls:0000038.control_mean
28.2086From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
5.15049From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.1688From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
7.58362From_analysisRNASeq.briggsae.WBls:0000038.control_median
9.99844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004122.257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
25.3348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
26.0417From_analysisRNASeq.briggsae.WBls:0000041.control_median
26.7486From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
28.4742From_analysisRNASeq.briggsae.WBls:0000041.control_mean
39.5564From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
33.1525From_analysisRNASeq.briggsae.WBls:0000041.control_median
34.0418From_analysisRNASeq.briggsae.WBls:0000041.control_mean
43.5175From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
46.8365From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006314.1236From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
15.3533From_analysisRNASeq.briggsae.WBls:0000063.control_mean
16.7726From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
19.982From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
25.8883From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
10.9476From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
14.619From_analysisRNASeq.briggsae.WBls:0000063.control_mean
15.4481From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010114.6692From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
15.2749From_analysisRNASeq.briggsae.total_over_all_stages.control_median
16.6082From_analysisRNASeq.briggsae.total_over_all_stages.control_median
17.3932From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138113
Ortholog (19)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans jtr-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG13945
Corresponding_CDS_historyCBG13945:bp194
CBG13945:bp255
Corresponding_transcriptCBG13945.1
Other_sequenceMHC07414
CBC13616_1
MJ01904
Experimental_infoExpr_patternExpr1056130
Microarray_resultsGPL8303_CB6_WBGene00034622_A
GPL8303_CB6_WBGene00034622_B
GPL8303_CB6_WBGene00034622_C
GPL14143_CBG13945_113-172_0.928_3_A
GPL14143_CBG13945_190-249_0.755_44_B
GPL14143_CBG13945_319-378_0.899_14_C
MethodGene