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WormBase Tree Display for Gene: WBGene00034583

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Name Class

WBGene00034583SMapS_parentSequencecb25.fpc3835
IdentityVersion1
NameSequence_nameCBG13902
Molecular_nameCBG13902
CBG13902.1
CBP44156
Other_nameCBG_13902Accession_evidenceNDBHE601467
Public_nameCBG13902
DB_infoDatabaseNDBlocus_tagCBG_13902
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00001904
RNASeq_FPKMWBls:000000244.4167From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
48.7453From_analysisRNASeq.briggsae.WBls:0000002.control_mean
49.3516From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
52.4676From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
23.1893From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
42.3563From_analysisRNASeq.briggsae.WBls:0000002.control_mean
46.8842From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000031.62399From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
3.89211From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
6.16023From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
4.35434From_analysisRNASeq.briggsae.WBls:0000003.control_mean
5.27881From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000417.0354From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
17.8494From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
18.6635From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
15.7863From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
16.756From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
17.0696From_analysisRNASeq.briggsae.WBls:0000004.control_mean
17.1068From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002723.1949From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
58.0965From_analysisRNASeq.briggsae.WBls:0000027.control_mean
71.2572From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
79.8375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
196.611From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
75.5473From_analysisRNASeq.briggsae.WBls:0000027.control_median
92.7252From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000357.83977From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038127.186From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
21.1614From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
40.8187From_analysisRNASeq.briggsae.WBls:0000038.control_median
4.15129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
53.2437From_analysisRNASeq.briggsae.WBls:0000038.control_mean
60.476From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004117.3405From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
23.4756From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
30.3071From_analysisRNASeq.briggsae.WBls:0000041.control_median
34.0463From_analysisRNASeq.briggsae.WBls:0000041.control_mean
37.1385From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
58.2308From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
41.373From_analysisRNASeq.briggsae.WBls:0000041.control_mean
45.3223From_analysisRNASeq.briggsae.WBls:0000041.control_median
53.506From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
58.5466From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006318.6557From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
22.294From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
22.7524From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
23.862From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
24.3699From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
19.4058From_analysisRNASeq.briggsae.WBls:0000063.control_mean
22.9544From_analysisRNASeq.briggsae.WBls:0000063.control_median
23.1564From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010123.862From_analysisRNASeq.briggsae.total_over_all_stages.control_median
37.0584From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
23.3353From_analysisRNASeq.briggsae.total_over_all_stages.control_median
39.0692From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (17)
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans Y54G2A.11.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG13902
Corresponding_CDS_historyCBG13902:bp194
CBG13902:bp255
Corresponding_transcriptCBG13902.1
Other_sequence (14)
Experimental_infoExpr_patternExpr1058599
Microarray_resultsGPL8303_CB6_WBGene00034583_A
GPL8303_CB6_WBGene00034583_B
GPL14143_CBG13902_378-437_0.644_185_C
GPL14143_CBG13902_1232-1291_0.895_17_B
GPL14143_CBG13902_1452-1511_0.948_1_A
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
MethodGene