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WormBase Tree Display for Gene: WBGene00033618

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Name Class

WBGene00033618SMapS_parentSequencecb25.fpc2888a2
IdentityVersion1
NameSequence_nameCBG12711
Molecular_nameCBG12711
CBG12711.1
CBP09148
CBG12711.2
Other_nameCBG_12711Accession_evidenceNDBHE600940
Public_nameCBG12711
DB_infoDatabaseNDBlocus_tagCBG_12711
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020.341797From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.360831From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.452484From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.654824From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.217286From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.351314From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.393685From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.082689From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.165378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.055126From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.062065From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.310326From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:00000240From_analysis (12)
WBls:00000270From_analysisRNASeq.briggsae.WBls:0000027.control_mean
RNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.123379From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0.128967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.425526From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.722086From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.76106From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.06981From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.078748From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.167844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.244172From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.320501From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
10.2073From_analysisRNASeq.briggsae.WBls:0000041.control_mean
40.262From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
17.7441From_analysisRNASeq.briggsae.WBls:0000041.control_median
18.5567From_analysisRNASeq.briggsae.WBls:0000041.control_mean
35.1677From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
35.3431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006315.5165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
6.35108From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
6.76178From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
6.83632From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
7.9618From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
8.6855From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.18227From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
6.79905From_analysisRNASeq.briggsae.WBls:0000063.control_median
7.76829From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001010.128967From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.06288From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.147172From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.29064From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (27)
ParalogWBGene00039734Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00039735Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00039733Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00039736Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00039753Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00039754Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00039752Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00039755Caenorhabditis briggsaeFrom_analysisInparanoid_8
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: RING-type zinc-finger; RING-type zinc-finger, LisH dimerisation motif; Zinc finger, RING/FYVE/PHD-type; and Zinc finger, RING-type. Is an ortholog of C. elegans F53F8.3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12711
Corresponding_CDS_historyCBG12711:bp194
Corresponding_transcriptCBG12711.1
CBG12711.2
Other_sequencePPC14664_1
Experimental_infoExpr_patternExpr1053737
Microarray_resultsGPL8303_CB6_WBGene00033618_A
GPL14143_CBG12711_505-564_0.928_9_A
MethodGene