WormBase Tree Display for Gene: WBGene00033419

WBGene00033419 SMap: S_parent: Sequence: cb25.fpc2888a2
  Identity: Version: 2
    Name: CGC_name: Cbr-dpy-5 From_analysis: Inferred_from_orthology
      Sequence_name: CBG12473
      Molecular_name: CBG12473
        CBG12473.1
        CBP09154
      Other_name: CBG_12473 Accession_evidence: NDB HE600940
      Public_name: Cbr-dpy-5
    DB_info: Database: NDB locus_tag CBG_12473
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:03 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-dpy-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dpy
    RNASeq_FPKM: WBls:0000002 1030.63 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        1641.4 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        518.242 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        932.25 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        250.902 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        725.246 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        835.698 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.039174 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.078348 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.026116 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0.123043 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.246086 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.164781 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.577817 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 0.545969 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        0.817134 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        1.0883 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        184.899 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
        737.961 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        0.622561 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
      WBls:0000027 3637.42 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        4843.61 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        5332.73 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        5560.68 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        3802.38 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        4567.56 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        4583.3 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 988.813 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 1085.06 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        1316.69 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        1454.41 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        2841.08 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        806.43 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        853.431 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 119.864 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        13.8823 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        205.719 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        24.6084 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        664.522 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        72.2362 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        124.123 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        128.383 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        188.123 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        189.897 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
      WBls:0000063 104.709 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        114.081 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        120.957 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        136.175 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        141.555 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        199.572 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        10.7629 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        115.273 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        117.519 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 141.555 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        919.753 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        124.67 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        817.21 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00136793
    Ortholog (26)
    Paralog (12)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Is an ortholog of C. elegans dpy-5. In C. elegans, dpy-5 is involved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle and post-embryonic body morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG12473
    Corresponding_CDS_history: CBG12473:bp194
    Corresponding_transcript: CBG12473.1
    Other_sequence (44)
  Experimental_info: Expr_pattern: Expr1057411
    Microarray_results: GPL8303_CB6_WBGene00033419_A
      GPL8303_CB6_WBGene00033419_B
      GPL14143_CBG12473_359-418_0.834_12_B
      GPL14143_CBG12473_713-772_0.866_3_C
      GPL14143_CBG12473_737-796_0.902_1_A
    Expression_cluster: WBPaper00059178:Cbr-htz-1(gu167)_downregulated
  Method: Gene